Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0278 ATGGCGAAGACATTAATTTCCTCTCCTTCGTTCCTTGGCACGCCTCTTCCTTCTATACCTCGCCCTGGTCTACAACCCTTCCATCTCCCTCATCGTAGGCTGGTCAGCACCAGAGTTAAATTCAACTTCCACGAAATCCCCCCGATCCACTCCCTCAACGATTCCTTTCACTTCAGTCAAATTGTTACTAGAGCTGAAGCGCTTCTTTATACGATCGCTGACGCTGCGGTTTCCGCCGATTCAGGTGCTGGTGCAGCGGCGTCGACCACCACAGATGTTGCCGTGCAGAAGAATGCAGGGTGGTTCAGTTTTATTTCTGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAAGATGGCCTGAGTGCTGTGCATGTGCCTTACGCATATGGATTTGCTATAATATTGCTCACTTTTATTGTTAAAGTTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTTGCTATGCAAAATCTTCAGCCAAAAATTAAGGCCATCCAAGAAAGATACGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGTTATACAAGCAAGCAGGTGTCAATCCATTGGCTGGTTGTTTACCGACTTTGGCTACCATTCCTGTGTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCCAATGAAGGTCTTTTGACAGAAGGCTTTTTCTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCCGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGTCATCCACCGTTGGGCTGGCAAGACACTGCAGCATATCTTGTTTTACCCATCCTCCTTGTTGTTTCTCAATATGTTTCTATGGAAATCATGAAACCCCCCCAGACTGATGATCCGGCTCAGAAAAATACACTTCTCGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCGCGCTGTCTGTTCCTTCAGGGCTATCAATTTACTGGTTTACAAACAATGTTTTAAGCACAGCACAACAAGTATGGCTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTTAATGAAAATGCAAGTGGAATTATTACTGCAGGACGTGCTAAGCGATCAGTTTCTCAGCCAGAAAGAACTGGTGAGAGGTTTAAACAGTTAAAGGAGAAGGAGAAAAAGCAGTTAAACAAGGTACTGCCTCAAAAAGAGGCTCAACCTCTGTCTTCTGTTTCTGATTCTGATGGTGGTTCAGATGAAGAGAGTGATAACAAGTTAGAGAACGAAGAAAATGAGAAATCTTACATTTGCATCAGTAGACAAAAAGAAAACCCTCCATTGAATCACAGTTGTCATTATTTGAACAAGTGA 1350 0.437 MAKTLISSPSFLGTPLPSIPRPGLQPFHLPHRRLVSTRVKFNFHEIPPIHSLNDSFHFSQIVTRAEALLYTIADAAVSADSGAGAAASTTTDVAVQKNAGWFSFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTFIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPERTGERFKQLKEKEKKQLNKVLPQKEAQPLSSVSDSDGGSDEESDNKLENEENEKSYICISRQKENPPLNHSCHYLNK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0278 449 Coils Coil 379 399 - -
Prci6g0278 449 MobiDBLite consensus disorder prediction 434 449 - -
Prci6g0278 449 NCBIfam membrane protein insertase YidC 129 342 IPR028055 -
Prci6g0278 449 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
Prci6g0278 449 PANTHER OXA1 71 387 IPR001708 GO:0016020|GO:0032977
Prci6g0278 449 MobiDBLite consensus disorder prediction 361 449 - -
Prci6g0278 449 MobiDBLite consensus disorder prediction 369 392 - -
Prci6g0278 449 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0278 Prci-Chr6 1623937 1629056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0278 29 387 Chloroplast and Mitochondria Gene Families AT2G28800 72.951 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0278 K03217 - pvy:116146259 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0278 6 1623937 1629056 Prci6g0278 6 1623937 1629056 ECH