Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0275 ATGGATCAGGGCAGCGAGAATAATAACGGATCGAGTGGGAGCAACGGGGGAGGGGGTTCGAGGTGGAACCCTACGAAAGAGCAGATAAATATGTTGGAGAATCTGTACAAGCAAGGGATAAGGACGCCCAGTGCTGAGCAGATACAGCAAATAACTGCTCGGCTCAGGGCGTTTGGTCACATCGAAGGCAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGAGACAGAAGCAGAAGCAAGAAACCATTGCTTATTTCAATCGCTTTCTTCATTCATCCCCTCACCATCCGCCACTCTTCTCTTCCCCGCTCTGCCCTAATGTGCTATGTGCGCCATATTATCTGCCACAAAGTGAAATGAGGTTTATTGCTCAACAACCCAAAGTGCTTCTGCCAGGAGCAGGGATTAGGAGGATGCCCATAAACTGTGAGGTGTACCAACAAATGCAAGAGACAGTAATGTCGGATGAAGGGCACTTGAGGAACAAAGAAACGCTTGCGCTTTTCCCTCTGCAGCCAACTGGCTTTCTGGAAGACAAAACTTCAGTTTCTGCTGATTCTACTCCGGCATCGGTTTCTCCGTCAGATCATCATCACATTAGTGAAGAAGATGGCCCACCACGAAACCAGCCCTTCTTTGATTTTCTTCCTTCTTCAGGCCAAGAGTTTCTGCATAGAGAGTAA 693 0.4776 MDQGSENNNGSSGSNGGGGSRWNPTKEQINMLENLYKQGIRTPSAEQIQQITARLRAFGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHSSPHHPPLFSSPLCPNVLCAPYYLPQSEMRFIAQQPKVLLPGAGIRRMPINCEVYQQMQETVMSDEGHLRNKETLALFPLQPTGFLEDKTSVSADSTPASVSPSDHHHISEEDGPPRNQPFFDFLPSSGQEFLHRE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0275 230 CDD homeodomain 21 81 IPR001356 GO:0003677
Prci6g0275 230 MobiDBLite consensus disorder prediction 182 230 - -
Prci6g0275 230 MobiDBLite consensus disorder prediction 182 198 - -
Prci6g0275 230 SMART HOX_1 17 84 IPR001356 GO:0003677
Prci6g0275 230 FunFam WUSCHEL-related homeobox 4 19 86 - -
Prci6g0275 230 Pfam Homeodomain 20 79 IPR001356 GO:0003677
Prci6g0275 230 MobiDBLite consensus disorder prediction 1 25 - -
Prci6g0275 230 SUPERFAMILY Homeodomain-like 14 86 IPR009057 -
Prci6g0275 230 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
Prci6g0275 230 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 215 IPR044555 GO:0003700|GO:0099402
Prci6g0275 230 Gene3D - 19 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0275 Prci-Chr6 1589816 1590950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0275 5 219 Wox Gene Family AT5G59340 44.488 1.01e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci6g0275 Homeodomain 4.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0275 - - gmx:100817714 249.98