Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0272 ATGGTTTTCTCTTCTATTCCGGTCTATTTAGATCCTCCCAATTGGCAGCCGCAACAGAATCAACAGCAATCAAATGGAACTGAAAACTATCAGCTGCTTCCTCATGCTGGAGGTGGTGGTGCAGGTTCAGTCCGGCCCGGTTCGATGGCTGACCGGGCCCGGCTAGCAAAGCTACCGCCACCCGAGGCAGCCCTAAAGTGTCCCCGTTGCGAATCCACCAACACAAAATTTTGTTACTTCAACAATTACAGCCTGTCTCAACCTCGTCACTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGCGGCGCTCTCAGGAACGTGCCGGTGGGAGGCGGATGCAGAAGAAACAAGAAGAGCAAAAGGAGCCGCTCGAAATCCCCGGCAGCCGCACCAGCCGCCGCTGACAAGCAGAGCCTGCTTCCCAACACCGCTGACAGCTCAATCCCCTCCGGCGCCGCCACCACGGAGCTGATCGGTCATTCGCAGCAACCTTCCAACTTACCATTCATGGCTTCCTTACAAAACCTGGGCGGCCGTTACGGCTTGGGGAACATGGGCCTGAGCTTGCGTGAGATCTTAGCCCAGAATGAGCCCATGGGCTTTCAAATCGGAGGGGTGGAGAACCAGTGGCGCTCACAACCATTCCCTAATTTCTTGAATGGGTTCGAGTCGAATAATTCAGTTGATTCTTCTTATCAGTTTCAAGGCGAGAGCATGGCAGTGGCGCAGAATGGAGTGATTGGAGATTCAAGTTCTAGGGCTACGACTCAGCTCCCACATGTTAAATTGGAAGAGATTGGAGCCCTAAATTTGTCAAGACCGCCCATAGGTAATAATAATAGTAATAATCAGTACTATTCTTGGACTGATTTATCGGGTCTTGCATCTTCTTCCACCAGCCATCTCTTGTAA 915 0.518 MVFSSIPVYLDPPNWQPQQNQQQSNGTENYQLLPHAGGGGAGSVRPGSMADRARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRSRSKSPAAAPAAADKQSLLPNTADSSIPSGAATTELIGHSQQPSNLPFMASLQNLGGRYGLGNMGLSLREILAQNEPMGFQIGGVENQWRSQPFPNFLNGFESNNSVDSSYQFQGESMAVAQNGVIGDSSSRATTQLPHVKLEEIGALNLSRPPIGNNNSNNQYYSWTDLSGLASSSTSHLL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0272 304 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
Prci6g0272 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 231 IPR045174 GO:0003700|GO:0006355
Prci6g0272 304 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Prci6g0272 304 MobiDBLite consensus disorder prediction 110 152 - -
Prci6g0272 304 MobiDBLite consensus disorder prediction 12 47 - -
Prci6g0272 304 MobiDBLite consensus disorder prediction 12 31 - -
Prci6g0272 304 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0272 Prci-Chr6 1571079 1572669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0272 34 303 C2C2-Dof Transcription Factor Family AT3G55370 42.424 7.49e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci6g0272 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0272 - - pcin:129314695 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2643 7 38386100 38387111 Prci6g0272 6 1571079 1572669 CCT