Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0264 ATGGAGGTCTTGAACCCTTCTCATCCTCCTCAGCATCAGCAGTATGTGGCCGCCAGAGACCCCTTCCATGGCTACTCGCCCCCTCTCACTCTGACTCTGCCCTTCGCCTTCCAGGAAGCCGCCACCTCTCAACTAACCTACCCCATGGCAGAATGCACTGAATCCGTTTACGTTGCCGTCGGAAAGTCGGTGGACAAAACCGTCCATTTGCTTCGATGGACTTTCGGCCGCTTTAGCAACTCACCAATTTGCATTCTTCATGTTCATCAGCCTTCCTCTATGATCCCCACTCTTTTAGGAAAATTGCCAGCAACCCAAGCAAATCCTGAAGTTGTATCTGCTTTTAGAAGAGAGGAAAGAGATCAAACCACGAGGCTTTTGGAAAATTACCTGAGCATTTGCCGTGTAGCTAAGGTTGAGGCAACAAGTGTGATAGGTGAAGCAGAGCAAGCGCAGAAAGGAATCATTGATTTAATCATCAAGCATGGTGTTAGGAAGCTTGTTATAGGAGCAGTGCCCGACAATCGCATGAAGGTGAGAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTGTTCACAAAGGTAAACACATATGGACAAGAGAAGCTTCTGAAAATCCTTGTTCCTTCTCTTCACAATCTCAACCTGAGATTGCTGCCTCAGGCAGCTTGTTAAGTAGGTCATTTCAATACGGTAAGAGTGAATTACTCAATAGATCAAATTCTGCAAGAACTACAATCTGCACAGGAATTGATAGTTGGTCTCAGGGCGAAATCTTGGAAACAGATCCAACTTCTTCATCAAAATCATCCACTTGTGTCAGTCACTGTTCTCCCCAAAATTCTACCGGGGGTTATTTGGAGACTTCTTTGGACGTTGAAGAAGATATACTTTGTAGTCAACTTACTGAAGCCAAAATAGAAGTTGAGGCTGCGAGAGATAAGGGTTTTGCAGAGCTTTTGAAATGCAAAAGATTTGAAGCAGAAGCTATAGAGGCCATAAAGAAGGTCAATATGTTTGAATCTGCTCGTGCATATGAAGTAAAGCTAAGAAAGGAGGCAGAGAATGAACTGAGAGCCACATTACAGGAGCAACAAAGGCTCTTGGATGAGAGTGAAGAAGTTGCTAGTGTGCTACAGAGGACCATGAGAAATATTGCCCTTCTGGACAGTCGTGTACAGGAGGCAAACTGCAGGCATGATGAAGCTGCAGATGAGTTATTACTAATTCAAGCATCCATCTCAACCCTGTGGCATGAAAAGCAGCAGATTAGGCGACAAAAAATGGAAGCCCACCGCTGGCTTGACCGATGGAAAAGTCGGGGACAATTTGGAGTTGCACACTGCCATGGGTTCATTGGATTTGCTGATGAATTACCAGAGTTAGCAGAATTTTCACTGTCAGATCTTCAAAATGCTACGTGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGTATTTATAAGGGGGAAATGCTGGGTAGAACAGTTGCTATAAGGAAGTTCCATCCACATAACATCCAAGGACCAGCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTTCAGCACCCTCATCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCTCTGGTGTATGAGTACTTACCCAATGGAAGTCTTCAAGACCTATTCCGGAAAAATAACAATCCCTCTTCGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCTAGTGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTAATCTAAAGCCTGAAACGATACTTCTTGACTCTGCACTTCGTTGCAAGATATGTGGATTTGGGTTCTGCAGACTGTTGACAGAGGAGTCACTCTATCGTCCCAGTTTCAGATTCAGCACTGAGCCAAAGGGTACTTCAGCATACACAGATCCAGAGCTTGAGAGGACTGGAATACTAACACCGAAGTCTGATATCTATTCCTTTGGACTTATCATTTTGCAACTCCTCACTGGCAGGACTATTCCAGTTGGGTTAGCTGGTGAAGTGCGCAAGGCAGTCTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACACAATTGGTTGAACTAGGACTGCAATGCTGTCAGCAAAATGGCAGAGATAGACCAGAGCTAACACCTACTTTAGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGATCGACCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCACGATCCCCAAGTTGCGGCAGACGGATTCACTTACGAAGGGGAAGCCATTCGTGAATGGCTGGAAAACGGTCATGAGACTTCTCCCATGACTAATTTAAAATTGAGTCACCTCCATCTCACGCCCAATCATGCACTTCGTCTTGCGATCCAAGACTGGCTTTGCAAATCCTGA 2496 0.4463 MEVLNPSHPPQHQQYVAARDPFHGYSPPLTLTLPFAFQEAATSQLTYPMAECTESVYVAVGKSVDKTVHLLRWTFGRFSNSPICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREERDQTTRLLENYLSICRVAKVEATSVIGEAEQAQKGIIDLIIKHGVRKLVIGAVPDNRMKVRRNSKKANYAAKNAPPFCEIWFVHKGKHIWTREASENPCSFSSQSQPEIAASGSLLSRSFQYGKSELLNRSNSARTTICTGIDSWSQGEILETDPTSSSKSSTCVSHCSPQNSTGGYLETSLDVEEDILCSQLTEAKIEVEAARDKGFAELLKCKRFEAEAIEAIKKVNMFESARAYEVKLRKEAENELRATLQEQQRLLDESEEVASVLQRTMRNIALLDSRVQEANCRHDEAADELLLIQASISTLWHEKQQIRRQKMEAHRWLDRWKSRGQFGVAHCHGFIGFADELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKFHPHNIQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLFRKNNNPSSTWNSRARMIAEIASALCFLHTSKPKTIVHGNLKPETILLDSALRCKICGFGFCRLLTEESLYRPSFRFSTEPKGTSAYTDPELERTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATQLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPQVAADGFTYEGEAIREWLENGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0264 831 CDD STK_N 55 205 - -
Prci6g0264 831 Pfam Protein tyrosine and serine/threonine kinase 492 743 IPR001245 GO:0004672|GO:0006468
Prci6g0264 831 Gene3D Transferase(Phosphotransferase) domain 1 560 760 - -
Prci6g0264 831 SUPERFAMILY RING/U-box 758 830 - -
Prci6g0264 831 PANTHER OS02G0152300 PROTEIN 56 825 - -
Prci6g0264 831 SUPERFAMILY Protein kinase-like (PK-like) 472 748 IPR011009 -
Prci6g0264 831 ProSiteProfiles U-box domain profile. 760 831 IPR003613 GO:0004842|GO:0016567
Prci6g0264 831 Pfam U-box domain 761 830 IPR003613 GO:0004842|GO:0016567
Prci6g0264 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 761 831 IPR013083 -
Prci6g0264 831 CDD RING-Ubox_WDSUB1-like 762 817 - -
Prci6g0264 831 Gene3D Phosphorylase Kinase; domain 1 465 559 - -
Prci6g0264 831 SMART Ubox_2 764 827 IPR003613 GO:0004842|GO:0016567
Prci6g0264 831 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 73 178 - -
Prci6g0264 831 Coils Coil 361 416 - -
Prci6g0264 831 ProSiteProfiles Protein kinase domain profile. 487 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0264 Prci-Chr6 1489721 1496720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0264 54 828 U-box Gene Family AT2G45910 37.888 2.05e-175 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci6g0264 PK_Tyr_Ser-Thr 2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0264 - - pcin:129312791 1665.2