Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0263 ATGGAGGTCTTGAACCCTTCTCATCCTCCTCAGCATCAGCAGTATGTGGCCGCCAGAGACCCCTTCCATGGCTACTCGCCCCCTCTCACTCTGACTCTGCCCTTCGCCTTCCAGGAAGCCGCCACCTCTCAACTAACCTACCCCATGGCAGAATGCACTGAATCCGTTTACGTTGCCGTCGGAAAGTCGGTGGACAAAACCGTCCATTTGCTTCGATGGACTTTCGGCCGCTTTAGCAACTCACCAATTTGCATTCTTCATGTTCATCAGCCTTCCTCTATGATCCCCACTCTTTTAGGAAAATTGCCAGCAACCCAAGCAAATCCTGAAGTTGTATCTGCTTTTAGAAGAGAGGAAAGAGATCAAACCACGAGGCTTTTGGAAAATTACCTGAGCATTTGCCGTGTAGCTAAGGTTGAGGCAACAAGTGTGATAGGTGAAGCAGAGCAAGCGCAGAAAGGAATCATTGATTTAATCATCAAGCATGGTGTTAGGAAGCTTGTTATAGGAGCAGTGCCCGACAATCGCATGAAGGTGAGAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTGTTCACAAAGGTAAACACATATGGACAAGAGAAGCTTCTGAAAATCCTTGTTCCTTCTCTTCACAATCTCAACCTGAGATTGCTGCCTCAGGCAGCTTGTTAAGTAGGTCATTTCAATACGATCCAACTTCTTCATCAAAATCATCCACTTGTGTCAGTCACTGTTCTCCCCAAAATTCTACCGGGGGTTATTTGGAGACTTCTTTGGACGTTGAAGAAGATATACTTTGTAGTCAACTTACTGAAGCCAAAATAGAAGTTGAGGCTGCGAGAGATAAGGGTTTTGCAGAGCTTTTGAAATGCAAAAGATTTGAAGCAGAAGCTATAGAGGCCATAAAGAAGGTCAATATGTTTGAATCTGCTCGTGCATATGAAGTAAAGCTAAGAAAGGAGGCAGAGAATGAACTGAGAGCCACATTACAGGAGCAACAAAGGCTCTTGGATGAGAGTGAAGAAGTTGCTAGTGTGCTACAGAGGACCATGAGAAATATTGCCCTTCTGGACAGTCGTGTACAGGAGGCAAACTGCAGGCATGATGAAGCTGCAGATGAGTTATTACTAATTCAAGCATCCATCTCAACCCTGTGGCATGAAAAGCAGCAGATTAGGCGACAAAAAATGGAAGCCCACCGCTGGCTTGACCGATGGAAAAGTCGGGGACAATTTGGAGTTGCACACTGCCATGGGTTCATTGGATTTGCTGATGAATTACCAGAGTTAGCAGAATTTTCACTGTCAGATCTTCAAAATGCTACGTGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGTATTTATAAGGGGGAAATGCTGGGTAGAACAGTTGCTATAAGGAAGTTCCATCCACATAACATCCAAGGACCAGCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTTCAGCACCCTCATCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCTCTGGTGTATGAGTACTTACCCAATGGAAGTCTTCAAGACCTATTCCGGAAAAATAACAATCCCTCTTCGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCTAGTGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTAATCTAAAGCCTGAAACGATACTTCTTGACTCTGCACTTCGTTGCAAGATATGTGGATTTGGGTTCTGCAGACTGTTGACAGAGGAGTCACTCTATCGTCCCAGTTTCAGATTCAGCACTGAGCCAAAGGGTACTTCAGCATACACAGATCCAGAGCTTGAGAGGACTGGAATACTAACACCGAAGTCTGATATCTATTCCTTTGGACTTATCATTTTGCAACTCCTCACTGGCAGGACTATTCCAGTTGGGTTAGCTGGTGAAGTGCGCAAGGCAGTCTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACACAATTGGTTGAACTAGGACTGCAATGCTGTCAGCAAAATGGCAGAGATAGACCAGAGCTAACACCTACTTTAGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGATCGACCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCACGATCCCCAAGTTGCGGCAGACGGATTCACTTACGAAGGGGAAGCCATTCGTGAATGGCTGGAAAACGGTCATGAGACTTCTCCCATGACTAATTTAAAATTGAGTCACCTCCATCTCACGCCCAATCATGCACTTCGTCTTGCGATCCAAGACTGGCTTTGCAAATCCTGA 2403 0.4486 MEVLNPSHPPQHQQYVAARDPFHGYSPPLTLTLPFAFQEAATSQLTYPMAECTESVYVAVGKSVDKTVHLLRWTFGRFSNSPICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREERDQTTRLLENYLSICRVAKVEATSVIGEAEQAQKGIIDLIIKHGVRKLVIGAVPDNRMKVRRNSKKANYAAKNAPPFCEIWFVHKGKHIWTREASENPCSFSSQSQPEIAASGSLLSRSFQYDPTSSSKSSTCVSHCSPQNSTGGYLETSLDVEEDILCSQLTEAKIEVEAARDKGFAELLKCKRFEAEAIEAIKKVNMFESARAYEVKLRKEAENELRATLQEQQRLLDESEEVASVLQRTMRNIALLDSRVQEANCRHDEAADELLLIQASISTLWHEKQQIRRQKMEAHRWLDRWKSRGQFGVAHCHGFIGFADELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKFHPHNIQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLFRKNNNPSSTWNSRARMIAEIASALCFLHTSKPKTIVHGNLKPETILLDSALRCKICGFGFCRLLTEESLYRPSFRFSTEPKGTSAYTDPELERTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATQLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPQVAADGFTYEGEAIREWLENGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0263 800 CDD STK_N 55 205 - -
Prci6g0263 800 CDD RING-Ubox_WDSUB1-like 731 786 - -
Prci6g0263 800 Pfam Protein tyrosine and serine/threonine kinase 461 712 IPR001245 GO:0004672|GO:0006468
Prci6g0263 800 SUPERFAMILY Protein kinase-like (PK-like) 441 717 IPR011009 -
Prci6g0263 800 Gene3D Phosphorylase Kinase; domain 1 434 528 - -
Prci6g0263 800 ProSiteProfiles Protein kinase domain profile. 456 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0263 800 SUPERFAMILY RING/U-box 727 799 - -
Prci6g0263 800 PANTHER OS02G0152300 PROTEIN 56 794 - -
Prci6g0263 800 Pfam U-box domain 730 799 IPR003613 GO:0004842|GO:0016567
Prci6g0263 800 SMART Ubox_2 733 796 IPR003613 GO:0004842|GO:0016567
Prci6g0263 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 800 IPR013083 -
Prci6g0263 800 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 73 178 - -
Prci6g0263 800 Gene3D Transferase(Phosphotransferase) domain 1 529 729 - -
Prci6g0263 800 Coils Coil 330 385 - -
Prci6g0263 800 ProSiteProfiles U-box domain profile. 729 800 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0263 Prci-Chr6 1489721 1496720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0263 54 797 U-box Gene Family AT2G45910 37.391 6.58e-173 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci6g0263 PK_Tyr_Ser-Thr 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0263 - - pcin:129312791 1587.78