Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0262 ATGGAGGTCTTGAACCCTTCTCATCCTCCTCAGCATCAGCAGTATGTGGCCGCCAGAGACCCCTTCCATGGCTACTCGCCCCCTCTCACTCTGACTCTGCCCTTCGCCTTCCAGGAAGCCGCCACCTCTCAACTAACCTACCCCATGGCAGAATGCACTGAATCCGTTTACGTTGCCGTCGGAAAGTCGGTGGACAAAACCGTCCATTTGCTTCGATGGACTTTCGGCCGCTTTAGCAACTCACCAATTTGCATTCTTCATGTTCATCAGCCTTCCTCTATGATCCCCACTCTTTTAGGAAAATTGCCAGCAACCCAAGCAAATCCTGAAGTTGTATCTGCTTTTAGAAGAGAGGAAAGAGATCAAACCACGAGGCTTTTGGAAAATTACCTGAGCATTTGCCGTGTAGCTAAGGTTGAGGCAACAAGTGTGATAGGTGAAGCAGAGCAAGCGCAGAAAGGAATCATTGATTTAATCATCAAGCATGGTGTTAGGAAGCTTGTTATAGGAGCAGTGCCCGACAATCGCATGAAGGTGAGAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTGTTCACAAAGGCAGCTTGTTAAGTAGGTCATTTCAATACGGTAAGAGTGAATTACTCAATAGATCAAATTCTGCAAGAACTACAATCTGCACAGGAATTGATAGTTGGTCTCAGGGCGAAATCTTGGAAACAGATCCAACTTCTTCATCAAAATCATCCACTTGTGTCAGTCACTGTTCTCCCCAAAATTCTACCGGGGGTTATTTGGAGACTTCTTTGGACGTTGAAGAAGATATACTTTGTAGTCAACTTACTGAAGCCAAAATAGAAGTTGAGGCTGCGAGAGATAAGGGTTTTGCAGAGCTTTTGAAATGCAAAAGATTTGAAGCAGAAGCTATAGAGGCCATAAAGAAGGTCAATATGTTTGAATCTGCTCGTGCATATGAAGTAAAGCTAAGAAAGGAGGCAGAGAATGAACTGAGAGCCACATTACAGGAGCAACAAAGGCTCTTGGATGAGAGTGAAGAAGTTGCTAGTGTGCTACAGAGGACCATGAGAAATATTGCCCTTCTGGACAGTCGTGTACAGGAGGCAAACTGCAGGCATGATGAAGCTGCAGATGAGTTATTACTAATTCAAGCATCCATCTCAACCCTGTGGCATGAAAAGCAGCAGATTAGGCGACAAAAAATGGAAGCCCACCGCTGGCTTGACCGATGGAAAAGTCGGGGACAATTTGGAGTTGCACACTGCCATGGGTTCATTGGATTTGCTGATGAATTACCAGAGTTAGCAGAATTTTCACTGTCAGATCTTCAAAATGCTACGTGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGTATTTATAAGGGGGAAATGCTGGGTAGAACAGTTGCTATAAGGAAGTTCCATCCACATAACATCCAAGGACCAGCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTTCAGCACCCTCATCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCTCTGGTGTATGAGTACTTACCCAATGGAAGTCTTCAAGACCTATTCCGGAAAAATAACAATCCCTCTTCGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCTAGTGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTAATCTAAAGCCTGAAACGATACTTCTTGACTCTGCACTTCGTTGCAAGATATGTGGATTTGGGTTCTGCAGACTGTTGACAGAGGAGTCACTCTATCGTCCCAGTTTCAGATTCAGCACTGAGCCAAAGGGTACTTCAGCATACACAGATCCAGAGCTTGAGAGGACTGGAATACTAACACCGAAGTCTGATATCTATTCCTTTGGACTTATCATTTTGCAACTCCTCACTGGCAGGACTATTCCAGTTGGGTTAGCTGGTGAAGTGCGCAAGGCAGTCTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACACAATTGGTTGAACTAGGACTGCAATGCTGTCAGCAAAATGGCAGAGATAGACCAGAGCTAACACCTACTTTAGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGATCGACCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCACGATCCCCAAGTTGCGGCAGACGGATTCACTTACGAAGGGGAAGCCATTCGTGAATGGCTGGAAAACGGTCATGAGACTTCTCCCATGACTAATTTAAAATTGAGTCACCTCCATCTCACGCCCAATCATGCACTTCGTCTTGCGATCCAAGACTGGCTTTGCAAATCCTGA 2415 0.4472 MEVLNPSHPPQHQQYVAARDPFHGYSPPLTLTLPFAFQEAATSQLTYPMAECTESVYVAVGKSVDKTVHLLRWTFGRFSNSPICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREERDQTTRLLENYLSICRVAKVEATSVIGEAEQAQKGIIDLIIKHGVRKLVIGAVPDNRMKVRRNSKKANYAAKNAPPFCEIWFVHKGSLLSRSFQYGKSELLNRSNSARTTICTGIDSWSQGEILETDPTSSSKSSTCVSHCSPQNSTGGYLETSLDVEEDILCSQLTEAKIEVEAARDKGFAELLKCKRFEAEAIEAIKKVNMFESARAYEVKLRKEAENELRATLQEQQRLLDESEEVASVLQRTMRNIALLDSRVQEANCRHDEAADELLLIQASISTLWHEKQQIRRQKMEAHRWLDRWKSRGQFGVAHCHGFIGFADELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKFHPHNIQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLFRKNNNPSSTWNSRARMIAEIASALCFLHTSKPKTIVHGNLKPETILLDSALRCKICGFGFCRLLTEESLYRPSFRFSTEPKGTSAYTDPELERTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATQLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPQVAADGFTYEGEAIREWLENGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0262 804 CDD STK_N 55 205 - -
Prci6g0262 804 CDD RING-Ubox_WDSUB1-like 735 790 - -
Prci6g0262 804 SMART Ubox_2 737 800 IPR003613 GO:0004842|GO:0016567
Prci6g0262 804 Pfam Protein tyrosine and serine/threonine kinase 465 716 IPR001245 GO:0004672|GO:0006468
Prci6g0262 804 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 734 804 IPR013083 -
Prci6g0262 804 ProSiteProfiles U-box domain profile. 733 804 IPR003613 GO:0004842|GO:0016567
Prci6g0262 804 SUPERFAMILY Protein kinase-like (PK-like) 445 721 IPR011009 -
Prci6g0262 804 Pfam U-box domain 734 803 IPR003613 GO:0004842|GO:0016567
Prci6g0262 804 MobiDBLite consensus disorder prediction 244 265 - -
Prci6g0262 804 Gene3D Phosphorylase Kinase; domain 1 438 532 - -
Prci6g0262 804 Gene3D Transferase(Phosphotransferase) domain 1 533 733 - -
Prci6g0262 804 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 74 178 - -
Prci6g0262 804 SUPERFAMILY RING/U-box 731 803 - -
Prci6g0262 804 PANTHER OS02G0152300 PROTEIN 56 798 - -
Prci6g0262 804 Coils Coil 334 389 - -
Prci6g0262 804 ProSiteProfiles Protein kinase domain profile. 460 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0262 Prci-Chr6 1489721 1496720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0262 54 801 U-box Gene Family AT2G45910 36.940 8.54e-169 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci6g0262 PK_Tyr_Ser-Thr 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0262 - - pcin:129312791 1595.1