Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0261 ATGGAGGTCTTGAACCCTTCTCATCCTCCTCAGCATCAGCAGTATGTGGCCGCCAGAGACCCCTTCCATGGCTACTCGCCCCCTCTCACTCTGACTCTGCCCTTCGCCTTCCAGGAAGCCGCCACCTCTCAACTAACCTACCCCATGGCAGAATGCACTGAATCCGTTTACGTTGCCGTCGGAAAGTCGGTGGACAAAACCGTCCATTTGCTTCGATGGACTTTCGGCCGCTTTAGCAACTCACCAATTTGCATTCTTCATGTTCATCAGCCTTCCTCTATGATCCCCACTCTTTTAGGAAAATTGCCAGCAACCCAAGCAAATCCTGAAGTTGTATCTGCTTTTAGAAGAGAGGAAAGAGATCAAACCACGAGGCTTTTGGAAAATTACCTGAGCATTTGCCGTGTAGCTAAGGTTGAGGCAACAAGTGTGATAGGTGAAGCAGAGCAAGCGCAGAAAGGAATCATTGATTTAATCATCAAGCATGGTGTTAGGAAGCTTGTTATAGGAGCAGTGCCCGACAATCGCATGAAGGTGAGAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTGTTCACAAAGGCAGCTTGTTAAGTAGGTCATTTCAATACGATCCAACTTCTTCATCAAAATCATCCACTTGTGTCAGTCACTGTTCTCCCCAAAATTCTACCGGGGGTTATTTGGAGACTTCTTTGGACGTTGAAGAAGATATACTTTGTAGTCAACTTACTGAAGCCAAAATAGAAGTTGAGGCTGCGAGAGATAAGGGTTTTGCAGAGCTTTTGAAATGCAAAAGATTTGAAGCAGAAGCTATAGAGGCCATAAAGAAGGTCAATATGTTTGAATCTGCTCGTGCATATGAAGTAAAGCTAAGAAAGGAGGCAGAGAATGAACTGAGAGCCACATTACAGGAGCAACAAAGGCTCTTGGATGAGAGTGAAGAAGTTGCTAGTGTGCTACAGAGGACCATGAGAAATATTGCCCTTCTGGACAGTCGTGTACAGGAGGCAAACTGCAGGCATGATGAAGCTGCAGATGAGTTATTACTAATTCAAGCATCCATCTCAACCCTGTGGCATGAAAAGCAGCAGATTAGGCGACAAAAAATGGAAGCCCACCGCTGGCTTGACCGATGGAAAAGTCGGGGACAATTTGGAGTTGCACACTGCCATGGGTTCATTGGATTTGCTGATGAATTACCAGAGTTAGCAGAATTTTCACTGTCAGATCTTCAAAATGCTACGTGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGTATTTATAAGGGGGAAATGCTGGGTAGAACAGTTGCTATAAGGAAGTTCCATCCACATAACATCCAAGGACCAGCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTTCAGCACCCTCATCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCTCTGGTGTATGAGTACTTACCCAATGGAAGTCTTCAAGACCTATTCCGGAAAAATAACAATCCCTCTTCGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCTAGTGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTAATCTAAAGCCTGAAACGATACTTCTTGACTCTGCACTTCGTTGCAAGATATGTGGATTTGGGTTCTGCAGACTGTTGACAGAGGAGTCACTCTATCGTCCCAGTTTCAGATTCAGCACTGAGCCAAAGGGTACTTCAGCATACACAGATCCAGAGCTTGAGAGGACTGGAATACTAACACCGAAGTCTGATATCTATTCCTTTGGACTTATCATTTTGCAACTCCTCACTGGCAGGACTATTCCAGTTGGGTTAGCTGGTGAAGTGCGCAAGGCAGTCTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACACAATTGGTTGAACTAGGACTGCAATGCTGTCAGCAAAATGGCAGAGATAGACCAGAGCTAACACCTACTTTAGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGATCGACCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCACGATCCCCAAGTTGCGGCAGACGGATTCACTTACGAAGGGGAAGCCATTCGTGAATGGCTGGAAAACGGTCATGAGACTTCTCCCATGACTAATTTAAAATTGAGTCACCTCCATCTCACGCCCAATCATGCACTTCGTCTTGCGATCCAAGACTGGCTTTGCAAATCCTGA 2322 0.4496 MEVLNPSHPPQHQQYVAARDPFHGYSPPLTLTLPFAFQEAATSQLTYPMAECTESVYVAVGKSVDKTVHLLRWTFGRFSNSPICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREERDQTTRLLENYLSICRVAKVEATSVIGEAEQAQKGIIDLIIKHGVRKLVIGAVPDNRMKVRRNSKKANYAAKNAPPFCEIWFVHKGSLLSRSFQYDPTSSSKSSTCVSHCSPQNSTGGYLETSLDVEEDILCSQLTEAKIEVEAARDKGFAELLKCKRFEAEAIEAIKKVNMFESARAYEVKLRKEAENELRATLQEQQRLLDESEEVASVLQRTMRNIALLDSRVQEANCRHDEAADELLLIQASISTLWHEKQQIRRQKMEAHRWLDRWKSRGQFGVAHCHGFIGFADELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKFHPHNIQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLFRKNNNPSSTWNSRARMIAEIASALCFLHTSKPKTIVHGNLKPETILLDSALRCKICGFGFCRLLTEESLYRPSFRFSTEPKGTSAYTDPELERTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATQLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPQVAADGFTYEGEAIREWLENGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0261 773 CDD STK_N 55 205 - -
Prci6g0261 773 ProSiteProfiles Protein kinase domain profile. 429 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0261 773 Coils Coil 303 358 - -
Prci6g0261 773 Pfam Protein tyrosine and serine/threonine kinase 434 685 IPR001245 GO:0004672|GO:0006468
Prci6g0261 773 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 74 178 - -
Prci6g0261 773 SUPERFAMILY RING/U-box 700 772 - -
Prci6g0261 773 Gene3D Transferase(Phosphotransferase) domain 1 502 702 - -
Prci6g0261 773 SUPERFAMILY Protein kinase-like (PK-like) 414 690 IPR011009 -
Prci6g0261 773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 703 773 IPR013083 -
Prci6g0261 773 SMART Ubox_2 706 769 IPR003613 GO:0004842|GO:0016567
Prci6g0261 773 Pfam U-box domain 703 772 IPR003613 GO:0004842|GO:0016567
Prci6g0261 773 PANTHER OS02G0152300 PROTEIN 56 767 - -
Prci6g0261 773 CDD RING-Ubox_WDSUB1-like 704 759 - -
Prci6g0261 773 Gene3D Phosphorylase Kinase; domain 1 407 501 - -
Prci6g0261 773 ProSiteProfiles U-box domain profile. 702 773 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0261 Prci-Chr6 1489721 1496720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0261 54 770 U-box Gene Family AT2G45910 36.692 3.89e-168 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci6g0261 PK_Tyr_Ser-Thr 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0261 - - pcin:129312791 1517.67