Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0256 ATGGGAAGTTGTTTGGGCACCCAAATTAAAGCTGAGAGCCAGTGTAACTCAGGGTCGACTTCAAAACACGTGAGCACAGATGGAAGTGATCTGCGCATCACGGGTAGCGAGGTTTCAAAGGCCTCGGCGACTAATACTAGTCTGAGTATGGGTGAGATCTTGCACTCAGCCAATTTGAAGAGCTTTACTTATGCAGAACTGAAGGCGGCCACGCGAAATTTCCGGCCAGATAATGTTTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGAAGTCCTTAACTGCTGCCAAGCCTGGCACTGGCATTGTTATTGCTGTGAAAAGACTTAAACAAGATAGTATGCAAGGTCACAGTGAGTGGTTGGCTGAAGTGAATTGCCTAGGACGATTTTCTCATCCCCATCTTGTAAAGTTGATTGGGTATTGCCTTGAAGACGAACACCGCCTTCTGGCGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTACTTTCAACCTCTCTCTTGGAGCCTCCGTTTGAAGGTCGCTCTAGGTGCTGCTAGAGGGCTTGCATTCCTTCACGGTGCTGAAACAAAAGTGATATATAGGGACTTCAAGACCTCAAATATCTTGCTTGATTCAAACTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAGGGATGGACCAGCAGGGGACGAAAGTCATGTCTCCACTAGAGTATTAGGAACCTATGGATATACAGCTCCTGAATATGTAGCCACCGGTCACCTGACTTCAAAGAGTGACGTCTATAGTTTTGGAGTAGTGCTGGTGGAAATGTTATCAGGTCGGCGAGCAATGGACAGGAGTCGACCATCAGGACAGCGCAACATGGTGCAGTGGGCTAAGCCATACCTGGCAAACAAACGCAAACTTTTTCGTGTGCTTGATAACCGTCTTGAAGGCCAGTATACAATAGACGAGGCGTACAAGACAGCTACACTGGCATTGCGATGCATTTCAACGGAATCCAAGTTCAGGCCAAGCATGGACGAGATTGTTTCTGAGTTGGAGCAGCTTCAAGTTCCCAGTGGAAATGGAGGCAAACAAAAGCCCGCTGTTAATAAATCCAGTGGTAGAAGAAGTGAAGGCGATGCTAAGAATGGGACGACCCCCACGGTTTATCCCCGTCCCTCTGCGTCCCCACTCTATGCTTGA 1215 0.4749 MGSCLGTQIKAESQCNSGSTSKHVSTDGSDLRITGSEVSKASATNTSLSMGEILHSANLKSFTYAELKAATRNFRPDNVLGEGGFGSVFKGWIDEKSLTAAKPGTGIVIAVKRLKQDSMQGHSEWLAEVNCLGRFSHPHLVKLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAARGLAFLHGAETKVIYRDFKTSNILLDSNYNPKLSDFGLARDGPAGDESHVSTRVLGTYGYTAPEYVATGHLTSKSDVYSFGVVLVEMLSGRRAMDRSRPSGQRNMVQWAKPYLANKRKLFRVLDNRLEGQYTIDEAYKTATLALRCISTESKFRPSMDEIVSELEQLQVPSGNGGKQKPAVNKSSGRRSEGDAKNGTTPTVYPRPSASPLYA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0256 404 Gene3D Phosphorylase Kinase; domain 1 50 159 - -
Prci6g0256 404 SUPERFAMILY Protein kinase-like (PK-like) 49 356 IPR011009 -
Prci6g0256 404 Gene3D Transferase(Phosphotransferase) domain 1 160 374 - -
Prci6g0256 404 MobiDBLite consensus disorder prediction 358 404 - -
Prci6g0256 404 MobiDBLite consensus disorder prediction 358 374 - -
Prci6g0256 404 PANTHER OS01G0588500 PROTEIN-RELATED 36 360 - -
Prci6g0256 404 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Prci6g0256 404 CDD STKc_IRAK 80 359 - -
Prci6g0256 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci6g0256 404 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Prci6g0256 404 FunFam Probable serine/threonine-protein kinase PBL8 160 375 - -
Prci6g0256 404 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Prci6g0256 404 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0256 Prci-Chr6 1466734 1469500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0256 52 356 Glycoside Hydrolase AT3G07070 46.732 1.68e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci6g0256 PK_Tyr_Ser-Thr 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0256 - - qsu:111987244 619.772