Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0255 ATGGGTGAGATCTTGCACTCAGCCAATTTGAAGAGCTTTACTTATGCAGAACTGAAGGCGGCCACGCGAAATTTCCGGCCAGATAATGTTTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGAAGTCCTTAACTGCTGCCAAGCCTGGCACTGGCATTGTTATTGCTGTGAAAAGACTTAAACAAGATAGTATGCAAGGTCACAGTGAGTGGTTGGCTGAAGTGAATTGCCTAGGACGATTTTCTCATCCCCATCTTGTAAAGTTGATTGGGTATTGCCTTGAAGACGAACACCGCCTTCTGGCGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTACTTTCAACCTCTCTCTTGGAGCCTCCGTTTGAAGGTCGCTCTAGGTGCTGCTAGAGGGCTTGCATTCCTTCACGGTGCTGAAACAAAAGTGATATATAGGGACTTCAAGACCTCAAATATCTTGCTTGATTCAAACTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAGGGATGGACCAGCAGGGGACGAAAGTCATGTCTCCACTAGAGTATTAGGAACCTATGGATATACAGCTCCTGAATATGTAGCCACCGTCATGGCAGGTCACCTGACTTCAAAGAGTGACGTCTATAGTTTTGGAGTAGTGCTGGTGGAAATGTTATCAGGTCGGCGAGCAATGGACAGGAGTCGACCATCAGGACAGCGCAACATGGTGCAGTGGGCTAAGCCATACCTGGCAAACAAACGCAAACTTTTTCGTGTGCTTGATAACCGTCTTGAAGGCCAGTATACAATAGACGAGGCGTACAAGACAGCTACACTGGCATTGCGATGCATTTCAACGGAATCCAAGTTCAGGCCAAGCATGGACGAGATTGTTTCTGAGTTGGAGCAGCTTCAAGTTCCCAGTGGAAATGGAGGCAAACAAAAGCCCGCTGTTAATAAATCCAGTGGTAGAAGAAGTGAAGGCGATGCTAAGAATGGGACGACCCCCACGGTTTATCCCCGTCCCTCTGCGTCCCCACTCTATGCTTGA 1077 0.4726 MGEILHSANLKSFTYAELKAATRNFRPDNVLGEGGFGSVFKGWIDEKSLTAAKPGTGIVIAVKRLKQDSMQGHSEWLAEVNCLGRFSHPHLVKLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAARGLAFLHGAETKVIYRDFKTSNILLDSNYNPKLSDFGLARDGPAGDESHVSTRVLGTYGYTAPEYVATVMAGHLTSKSDVYSFGVVLVEMLSGRRAMDRSRPSGQRNMVQWAKPYLANKRKLFRVLDNRLEGQYTIDEAYKTATLALRCISTESKFRPSMDEIVSELEQLQVPSGNGGKQKPAVNKSSGRRSEGDAKNGTTPTVYPRPSASPLYA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0255 358 Gene3D Phosphorylase Kinase; domain 1 3 110 - -
Prci6g0255 358 ProSitePatterns Protein kinases ATP-binding region signature. 31 63 IPR017441 GO:0005524
Prci6g0255 358 FunFam Serine/threonine-protein kinase BIK1 1 110 - -
Prci6g0255 358 Pfam Protein tyrosine and serine/threonine kinase 29 310 IPR001245 GO:0004672|GO:0006468
Prci6g0255 358 Gene3D Transferase(Phosphotransferase) domain 1 111 328 - -
Prci6g0255 358 PANTHER OS01G0588500 PROTEIN-RELATED 4 314 - -
Prci6g0255 358 SUPERFAMILY Protein kinase-like (PK-like) 7 310 IPR011009 -
Prci6g0255 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Prci6g0255 358 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 111 323 - -
Prci6g0255 358 MobiDBLite consensus disorder prediction 312 358 - -
Prci6g0255 358 MobiDBLite consensus disorder prediction 312 328 - -
Prci6g0255 358 CDD STKc_IRAK 31 313 - -
Prci6g0255 358 ProSiteProfiles Protein kinase domain profile. 25 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0255 Prci-Chr6 1466734 1469501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0255 3 310 Glycoside Hydrolase AT3G07070 46.278 1.36e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci6g0255 PK_Tyr_Ser-Thr 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0255 - - jre:108992974 565.074