Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0253 ATGGGAAGTTGTTTGGGCACCCAAATTAAAGCTGAGAGCCAGTGTAACTCAGGGTCGACTTCAAAACACGTGAGCACAGATGGAAGTGATCTGCGCATCACGGGTAGCGAGGTTTCAAAGGCCTCGGCGACTAATACTAGTCTGAGTATGGGTGAGATCTTGCACTCAGCCAATTTGAAGAGCTTTACTTATGCAGAACTGAAGGCGGCCACGCGAAATTTCCGGCCAGATAATGTTTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGAAGTCCTTAACTGCTGCCAAGCCTGGCACTGGCATTGTTATTGCTGTGAAAAGACTTAAACAAGATAGTATGCAAGGTCACAGTGAGTGGTTGGCTGAAGTGAATTGCCTAGGACGATTTTCTCATCCCCATCTTGTAAAGTTGATTGGGTATTGCCTTGAAGACGAACACCGCCTTCTGGCGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTACTTTCAACCTCTCTCTTGGAGCCTCCGTTTGAAGGTCGCTCTAGGTGCTGCTAGAGGGCTTGCATTCCTTCACGGTGCTGAAACAAAAGTGATATATAGGGACTTCAAGACCTCAAATATCTTGCTTGATTCAAACTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAGGGATGGACCAGCAGGGGACGAAAGTCATGTCTCCACTAGAGTATTAGGAACCTATGGATATACAGCTCCTGAATATGTAGCCACCGTCATGGCAGGTCACCTGACTTCAAAGAGTGACGTCTATAGTTTTGGAGTAGTGCTGGTGGAAATGTTATCAGGTCGGCGAGCAATGGACAGGAGTCGACCATCAGGACAGCGCAACATGGTGCAGTGGGCTAAGCCATACCTGGCAAACAAACGCAAACTTTTTCGTGTGCTTGATAACCGTCTTGAAGGCCAGTATACAATAGACGAGGCGTACAAGACAGCTACACTGGCATTGCGATGCATTTCAACGGAATCCAAGTTCAGGCCAAGCATGGACGAGATTGTTTCTGAGTTGGAGCAGCTTCAAGTTCCCAGTGGAAATGGAGGCAAACAAAAGCCCGCTGTTAATAAATCCAGTGGTAGAAGAAGTGAAGGCGATGCTAAGAATGGGACGACCCCCACGGTTTATCCCCGTCCCTCTGCGTCCCCACTCTATGCTTGA 1224 0.4755 MGSCLGTQIKAESQCNSGSTSKHVSTDGSDLRITGSEVSKASATNTSLSMGEILHSANLKSFTYAELKAATRNFRPDNVLGEGGFGSVFKGWIDEKSLTAAKPGTGIVIAVKRLKQDSMQGHSEWLAEVNCLGRFSHPHLVKLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAARGLAFLHGAETKVIYRDFKTSNILLDSNYNPKLSDFGLARDGPAGDESHVSTRVLGTYGYTAPEYVATVMAGHLTSKSDVYSFGVVLVEMLSGRRAMDRSRPSGQRNMVQWAKPYLANKRKLFRVLDNRLEGQYTIDEAYKTATLALRCISTESKFRPSMDEIVSELEQLQVPSGNGGKQKPAVNKSSGRRSEGDAKNGTTPTVYPRPSASPLYA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0253 407 CDD STKc_IRAK 80 362 - -
Prci6g0253 407 Gene3D Transferase(Phosphotransferase) domain 1 160 377 - -
Prci6g0253 407 MobiDBLite consensus disorder prediction 361 407 - -
Prci6g0253 407 MobiDBLite consensus disorder prediction 361 377 - -
Prci6g0253 407 Gene3D Phosphorylase Kinase; domain 1 50 159 - -
Prci6g0253 407 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 160 372 - -
Prci6g0253 407 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Prci6g0253 407 ProSiteProfiles Protein kinase domain profile. 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0253 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci6g0253 407 SUPERFAMILY Protein kinase-like (PK-like) 49 359 IPR011009 -
Prci6g0253 407 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Prci6g0253 407 Pfam Protein tyrosine and serine/threonine kinase 78 359 IPR001245 GO:0004672|GO:0006468
Prci6g0253 407 PANTHER OS01G0588500 PROTEIN-RELATED 36 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0253 Prci-Chr6 1466734 1469503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0253 52 359 Glycoside Hydrolase AT3G07070 46.278 1.78e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci6g0253 PK_Tyr_Ser-Thr 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0253 - - qsu:111987244 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2649 7 38433441 38436179 Prci6g0253 6 1466734 1469503 CCT