Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0245 ATGGATCCTCAATTGGATGGAAGCCATGGTTTAATAAACGGTTATAGACTTGATGATGCCGCCGTCAGCTCCGATTCCAACTATTTGCCATATCCAGCGAAAGAGTGGGAAATCGATGAAAACTATTGGAAATTTCTTAACTTCAAAACGGATCCTTTGTATCAACCTTATGCGACTCCCGTTAGTTTTGCTCTGCATACTGGCGTGAAATATGAAGGATCAGAGTGGTTAGTTCCCTCCTCGACCATGGAACCTATAGGAGGCATGTCAGATGTGGCAGCTGCGTCCACGATTTCGCCACCAGATCCTTCGCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATTCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCTTTGAGCCTACAAGTCACGGAGAAATCATTCTATGATGCTCTCCAAAAGGATCATCCTCATTCCCCTAATCAGCATCCCCTGGACATTCATCAGAATCTTGATAGCACAGATGATAACTACTGTTGTGGTAGTAGTATTGATTGTGTCAATGACAGTAGCAGCACCAGCAAGTTTCAGGGCGCTAATAAGCCCTCTTCCCCCGATGCTCCATCTTCAGGTTATTATGCGTCCCAGTTAAATTTCCAACCCATCTCTGAGAAATCCTCTCAACCTCCGAGTGCTTATACTTGTATCAGCGACGGATCGTCAGATGTGAATTCCTCTTTTACTAAGATATTGGCTCAAAATATCTTTACTGATGCAGAATCTGTCTCGCAATTTAAAAGGGGGTTGGAAGAAGCTAGCAAATTTCTTCCTAGAGGATTTCAACTTGTCACTGGTCTGGAGAGCAACAATGCTCTTCCAGAGTCAAAGGGAGAGGCTAAAAAGACAGGAGGAAATATCATGGAGAACTCACATGGATTAAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATGCAGAAGATGGGAGAAGTAACAAGCAGTCGGCAGTATATGTGGACGAGAGTGATATATCAGAAATGTTTGATAAGGTGTTGCTTAGCGTTGAGAATGTTCCATTATGCGAGGAACACCACAAATGGTTGCAGAATGGGACAGACTTCGCCAAAGAGCCAAGTGAACAGCCAAAGTCATTTACTGGGGGGAAGACCCGCGGCAGGAGACGAGGCAAGAAGAAGGAGACCGTGGATTTGAGGACTCTTATGGCTCTATGTGCGCAAGCTGTGTCTGCAAATGACCGTAGAACTGCCAATGAACTACTAAAGCAGATCAGGCAGCATTGTTCTCCACTTGGCGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCTGTGGTACTGGAACCCAAATATTCTACAACTCCCTAAGCTCCAAGAGGATTTCTGCTGCTAATATTTTGAGAGCTTACTCAGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTTGCAAATAAGATGATTATGAAAGCAGCTGAAAAGGCAGAAACTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTCTCTCAAAGAGCTGGCGGACCTCCGAAGCTACGCATCACAGGGATAGAATTGCCCCGAGCAGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCTAATTATTGCGAACGTTTTAATGTCCCGTTTGAATATACAGCCATAGCATCACAAAACTGGGAAACCATCCCATTGAAGGACTTCAAGATTGAGAGAAACGAGCTGCTTGCTGTGAACTGTCTGATGAGATTTAAAAATTTACTGGATGAGACGATGGAGGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTGATATTTTTGTTCAATCCATTGTCAATGGATCCTACAACGCTCCTTTCTTTGCCACACGGTTCAAAGAGGCACTGTTCCATTTTTCTGCCATGTATGACATGTTTGACACTGTCATACCACGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGGTCATGAATGTGGTTGCGTGTGAAGGGATCGAGAGGGTTGAGAGGCCCGAGGCATACAAACACTGGCAAGTCAGGAGTACAAGGGCTGGTTTCAGGCAGCTCCCAATGCCAAAAGAGATAATGGTCAAATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGCCGCATCATGTATGCTTCCACATGTTGGGTCCCATCATAA 2340 0.4419 MDPQLDGSHGLINGYRLDDAAVSSDSNYLPYPAKEWEIDENYWKFLNFKTDPLYQPYATPVSFALHTGVKYEGSEWLVPSSTMEPIGGMSDVAAASTISPPDPSLEDADFSETMRYISQILMEENFEQKPSMFYDPLSLQVTEKSFYDALQKDHPHSPNQHPLDIHQNLDSTDDNYCCGSSIDCVNDSSSTSKFQGANKPSSPDAPSSGYYASQLNFQPISEKSSQPPSAYTCISDGSSDVNSSFTKILAQNIFTDAESVSQFKRGLEEASKFLPRGFQLVTGLESNNALPESKGEAKKTGGNIMENSHGLKGRKNHEREASDAEDGRSNKQSAVYVDESDISEMFDKVLLSVENVPLCEEHHKWLQNGTDFAKEPSEQPKSFTGGKTRGRRRGKKKETVDLRTLMALCAQAVSANDRRTANELLKQIRQHCSPLGDASQRLAHYFANGLEARLSGCGTGTQIFYNSLSSKRISAANILRAYSVLISVCPFRKFAYFFANKMIMKAAEKAETLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPRAGFRPAELIEETGRRLSNYCERFNVPFEYTAIASQNWETIPLKDFKIERNELLAVNCLMRFKNLLDETMEVKSPRDAVLNLIRKMNPDIFVQSIVNGSYNAPFFATRFKEALFHFSAMYDMFDTVIPRENEWRLMLEREFLGREVMNVVACEGIERVERPEAYKHWQVRSTRAGFRQLPMPKEIMVKFSEKLKAWYHRDFVIDEDNNWMLQGWKGRIMYASTCWVPS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0245 779 MobiDBLite consensus disorder prediction 310 327 - -
Prci6g0245 779 MobiDBLite consensus disorder prediction 370 397 - -
Prci6g0245 779 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 321 771 IPR005202 -
Prci6g0245 779 MobiDBLite consensus disorder prediction 189 209 - -
Prci6g0245 779 MobiDBLite consensus disorder prediction 288 333 - -
Prci6g0245 779 Pfam GRAS domain family 403 776 IPR005202 -
Prci6g0245 779 ProSiteProfiles GRAS family profile. 393 777 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0245 Prci-Chr6 1419425 1423016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0245 113 779 GRAS Transcription Factor Family AT1G07530 50.000 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci6g0245 GRAS 1.3e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0245 - - pcin:129314564 1571.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2655 7 38498615 38502501 Prci6g0245 6 1419425 1423016 CCT
Prci6g0245 6 1419425 1423016 Prci6g0245 6 1419425 1423016 ECH
Prci2g2019 2 15344528 15346790 Prci6g0245 6 1419425 1423016 ECH