Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0243 TTTTTTAAAAGTCAAACTTGTTCTCTGGTTCTCGTTCAACTGGTATCTATGGATGCTCTTCTGGAGAATTTTCCCGGTGCCGTAAATGGATTCAGATTTGAAAATGGTCATATTTCAGAATTTCCAATTCAGAATCCCATAAACGGGTTTACATATGATGATAAAGCCGACTTTTCGTCCTTCATTCAAACCAATTCAGAATTTCATGGTGAGTCGGGTCATTCTTCTAGCACGAGCACGAACGAAGAATCGGCGGACAGTAACAAATATTCCAATCCAGCTCTCAGATTCATCAGTGAAATCCTCTTGGATGAAGAAGACGACCTGGAGCGCAAGCCCTGCATGTTACAAGACTGCTTAGCTCTCCAGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCACTTCTCCTCATCAAATCTCTAATTGCTTCCATGGTGAAAACACTGATAGCCCAGATGATCAAAACTTCTTCCCTACCCATAGTTTCGAGAGCAGCGGCAGCTATACCACTGATAATACATCTGACTCCGAATGGGTGAACGGTGTCGTTAATTCCTCAGAAAACGTCCTCGATATTTCAGATGTGCCTCCCGATCTATATGGGGGGATCCTTGATCAGAGTAATCTGCAGATGAATCTAGGGGATTCCCTGCGCAACTCAGGATCCAGAGGAACAAGGGAAAAGAGAACCCTTTGGGTGGGTGATTCTATAAACGAAGAAGAGGGCAGAGGCAGCAAACTTTCTGCTGTCAGTTCGGATGATTCAGAGCCGACGGAAATGTTTGATGAAGTACTTCTTTGTAATCTCAGAACTACCCAGTCCTCGTCATGTGGCCCTGGATCATCTCAAAATGGCACATTCCACCTGAATGTCGACTCTGGAGGATCAAACGGGAAGGCGACGCGTTCAAAGAAAGGGTCTAACAAAGGGACAGCAGTAGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAACGAGCTTCTCAAGCAGATCAGGCTGCACTGTTCCCCTTTTGGCGATGGGATCGAACGCTTAGCTCATTACTTTGCCAATGGTCTTGAGACGCGTTTGGCTGCTGGGACACCATCATATAACCCCCTTGATTGCGATGGAGCAACTGCTGCTGAGATGTTGAAAGCTTACAAGCTATACATCACAACATCTCCTTTCCTCAGGATTTCAAATTTCTTGGCTAACAGAACAATTCTGAATCTGGTAGAAGGTGAAAATAACCTTCACATCATTGATTTTGGCATCTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCGGAAAGACAAGGCGGCCCTCCCAAGCTTCGTATGACTGGGATTGAGTTCCCTCAATCAGGGTTTCGGCCAGCAGAGAGGATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAATACAAATGCTTGGCACAAAAATGGGAAACCATCCGACTGGAGGATCTCAAGATCGACAGGACCGAGATAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGCCTGATGAAACTGTGTCCGCAAACAGTCCAAGAGATGCTGTTTTGAAGCTGATAAGGAAGATAAACCCGAATATGTTCATACATGGGGTTGTCAATGGCACCTACAATGCCCCATTTTTCGTGACTCGGTTCAGGGAGGCTCTGTTCCACTTCTCATCTTTGTTTGACATGTTCGAGGCGAATGTGCCCCGGGAAGATCCAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTATCGCGTGCGAGGGGGCAGAAAGGGTTGAGCGGCCAGAGACTTACAAGCAGTGGCAGATTAGGAATCGTAGAGCTGGGTTCAAGCAACTCCGTATGGACGCACAAATCTTTAATAAAGCTCAAGAAATGGTAAAGACGGAATATCACAAGGACTTTGCCGTGGATGAGGATAGCAGGTGGGTTTTACAGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTATCTGGAAACCTGCTTAA 2079 0.4622 FFKSQTCSLVLVQLVSMDALLENFPGAVNGFRFENGHISEFPIQNPINGFTYDDKADFSSFIQTNSEFHGESGHSSSTSTNEESADSNKYSNPALRFISEILLDEEDDLERKPCMLQDCLALQAAEKSFYDALGRSYPTSPHQISNCFHGENTDSPDDQNFFPTHSFESSGSYTTDNTSDSEWVNGVVNSSENVLDISDVPPDLYGGILDQSNLQMNLGDSLRNSGSRGTREKRTLWVGDSINEEEGRGSKLSAVSSDDSEPTEMFDEVLLCNLRTTQSSSCGPGSSQNGTFHLNVDSGGSNGKATRSKKGSNKGTAVDLWTLLTQCAQAVASFDQRNANELLKQIRLHCSPFGDGIERLAHYFANGLETRLAAGTPSYNPLDCDGATAAEMLKAYKLYITTSPFLRISNFLANRTILNLVEGENNLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRMTGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYKCLAQKWETIRLEDLKIDRTEITVVNCLYRLKNLPDETVSANSPRDAVLKLIRKINPNMFIHGVVNGTYNAPFFVTRFREALFHFSSLFDMFEANVPREDPERLWFEKGIFGRDAMNVIACEGAERVERPETYKQWQIRNRRAGFKQLRMDAQIFNKAQEMVKTEYHKDFAVDEDSRWVLQGWKGRIIHALSIWKPA 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0243 692 MobiDBLite consensus disorder prediction 281 313 - -
Prci6g0243 692 Pfam GRAS domain family 322 690 IPR005202 -
Prci6g0243 692 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 246 680 IPR005202 -
Prci6g0243 692 MobiDBLite consensus disorder prediction 151 179 - -
Prci6g0243 692 ProSiteProfiles GRAS family profile. 311 690 IPR005202 -
Prci6g0243 692 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0243 Prci-Chr6 1401475 1403842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0243 81 691 GRAS Transcription Factor Family AT2G29060 46.240 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci6g0243 GRAS 2.3e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0243 - - gmx:100815586 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0243 6 1401475 1403842 Prci7g2657 7 38504102 38507041 CCT
Prci6g0243 6 1401475 1403842 Prci6g0243 6 1401475 1403842 ECH