Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0234 ATGAGTTTCGTCTTCCGAGGGAGTAGAGGAGACATGGAAAGTGGATTTTCAGAATATGTTCCCGAAAGAACCACGATGCGTGTTCACCCGGCCCGGCCAGTAAATAGCAATACTCTAGCTTTTCTTATAACAGTTATCTTGCTATTTATGATATTGAACTCTCCCCAAATGTCACATTTTTTGATGTGGCTCATGCTGGTTGTGTTTGTGATGGCCACAAGCCTGAGGATGTATGCAACTTGGCAACAACTTCAAGCTCAAGCAAGGGCTCATGCTGCAGCAGCTGAATTACAACTTCATGTGCCACAATCAATAGCAATTGCAACTAGAGGACGCTTGCAAGGACTGAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTTGACTATGAAACATTGAGGGCTCTGGACTCTGACACCGGTTCTAGTGCTACTTCAATGACTGATGAAGAGATAAATGCCTTACCTGTTCACAAATATAAAGTTCCTGTCCCAACAAAGGATGGCTCAGCTGGGTTGGCATCCTCTTCATGTTCAACTGAGGATAATGGAGGAACAGAGGGAAATGTGAATGGCTCAGAAGATGAACTAACATGTACTATATGTTTGGAACAAGTTAAGGGAGGGGAACTAGTTCGTAGCTTGCCATGCTTGCATCAGTTTCATATGAACTGCATCGATCCGTGGCTGCGACATCAAGCAAAATGCCCTGTGTGTAAATTTAGGATGGGGTCGGGATCTCAGGGAAACAGGGGGCAGAGTGGGTCTGAAGGCTTAGATATTGTGTAG 795 0.4491 MSFVFRGSRGDMESGFSEYVPERTTMRVHPARPVNSNTLAFLITVILLFMILNSPQMSHFLMWLMLVVFVMATSLRMYATWQQLQAQARAHAAAAELQLHVPQSIAIATRGRLQGLRLQLALLDREFDELDYETLRALDSDTGSSATSMTDEEINALPVHKYKVPVPTKDGSAGLASSSCSTEDNGGTEGNVNGSEDELTCTICLEQVKGGELVRSLPCLHQFHMNCIDPWLRHQAKCPVCKFRMGSGSQGNRGQSGSEGLDIV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0234 264 CDD RING-H2_PA-TM-RING 200 242 - -
Prci6g0234 264 ProSiteProfiles Zinc finger RING-type profile. 201 242 IPR001841 -
Prci6g0234 264 PANTHER TARGET OF ERK KINASE MPK-1 1 248 - -
Prci6g0234 264 SMART ring_2 201 241 IPR001841 -
Prci6g0234 264 SUPERFAMILY RING/U-box 196 245 - -
Prci6g0234 264 MobiDBLite consensus disorder prediction 173 192 - -
Prci6g0234 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 248 IPR013083 -
Prci6g0234 264 Pfam Ring finger domain 200 242 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0234 Prci-Chr6 1341425 1345549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0234 1 250 C3H Transcription Factor Family AT3G55530 68.702 3.26e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0234 K16283 - gmx:100805406 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0234 6 1341425 1345549 Prci6g0234 6 1341425 1345549 ECH