Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0223 ATGGAGTCTGAAGATCTGCAGGCAACATCATCAGAAACAAAGGCAAGCGATGAGCAAGGAGGAAGTCAGGCAACAGGGTCGTACGAGTGCACCTTCTGTAAAAGGGGATTCTCTAATGCACAAGCATTGGGAGGCCACATGAACATACACAGGAAAGACAAAGCCAAGCTGAAGCAATCTTCCAAGCAAGCTCCTCGTCGTCATCGGCCTAGCTGGATTACGGAAGATTCCTCTTCCAGAGATGTAGCCTCAGAACCTCGCTTGAAGCAGCTTCCACTATTCGCAGAAACGCCACAAAAGGCAGAAGAATTAGGTCATATTCATGATGGCGGAACTGCTGAAGAAATCAAGGGTTCGCCATCGGATTTAGACCTTGAACTCAGACTAGGGCCCGACCCACCCTCTCCCACTGTTGGTACCCCAAAATTCTTTTGA 435 0.4897 MESEDLQATSSETKASDEQGGSQATGSYECTFCKRGFSNAQALGGHMNIHRKDKAKLKQSSKQAPRRHRPSWITEDSSSRDVASEPRLKQLPLFAETPQKAEELGHIHDGGTAEEIKGSPSDLDLELRLGPDPPSPTVGTPKFF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0223 144 MobiDBLite consensus disorder prediction 101 122 - -
Prci6g0223 144 Pfam C2H2-type zinc finger 28 52 - -
Prci6g0223 144 Gene3D Classic Zinc Finger 3 85 - -
Prci6g0223 144 MobiDBLite consensus disorder prediction 51 65 - -
Prci6g0223 144 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Prci6g0223 144 MobiDBLite consensus disorder prediction 1 27 - -
Prci6g0223 144 SUPERFAMILY beta-beta-alpha zinc fingers 27 55 IPR036236 -
Prci6g0223 144 SMART c2h2final6 28 50 IPR013087 -
Prci6g0223 144 MobiDBLite consensus disorder prediction 68 83 - -
Prci6g0223 144 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Prci6g0223 144 MobiDBLite consensus disorder prediction 44 144 - -
Prci6g0223 144 PANTHER OS07G0101800 PROTEIN 6 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0223 Prci-Chr6 1276927 1277431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0223 21 140 C2H2 Transcription Factor Family AT3G53820 41.304 1.59e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci6g0223 zf-C2H2_6 7.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0223 - - pcin:129313190 295.819