Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0215 ATGGAACACGAAAAAAATCCTGTCCTAGAAGCAAGTTCCATGCAGGAGATAGAGATAACGGTTGCCTCTGAAAAAATTGATCTTCTTCCCGTAGCAACTGAGTCATCTTGCAGTTCTCTTTGCCCTTTTTCCAAACGAGAACATAGCCTTCAGGCATCCGAAGAGTCATCAAAGTCGGCAAAGAAACTTTGTGGACTCATAGTTTTCTATGCTATGGTTATGCTTGTAGAAGCTGTTGGTGGCTTGAAAGCCAACAGCCTTGCTATTATCAGTGATGCTGCGCATTTGCTTTCGGATACTGCTGGATTCTCTATCTCTCTATTTGCGGTGTGGGCATCAGGTTGGGAGGCAACACCACAACAGTCTTTTGGATACAATCGGCTTGAGGTTCTGGGTGCTCTTTTTTCTGTTCAGTTAATCTGGCTAATATCTGGCTTTTTGATGTATGAAGCTGTGGGGAGACTTTTTTACAGAAAGGCCAGGGTGAATGGCATGCTCATGCTTTCAATTGCAGCACTTGGATTTTCTCTTAACTTAATTATGGTTTTATGGCTTGGTCATGATCACAGTCACCACCACCACCACCATAGCTGTGGAGACTTAAATCATGATCATGGAAAGGAGGAGCTGCATAATAACATGACTGATGAAAAGGAGCTTAGTCTAGTCTCGAGTAGTCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATCCAATCTGTCGGGGTGATGATTGCTGGAGCTGTAATATGGGCTAAACCAGATTGGTTAGTGGTTGACCTGATTTGTACTCTAATATTCTGTGTTATATCTCTGGGAACTACAGTGCCAACGCTCAGTAACATTTACAGCATTCTGATGGAGAGGACACCAAGTGAGATCAATATCACGAAGCTGGAAAGTGACCTCAAGGGTATGAAGGGAGTGGAAGACATCCGCGACTTGCACATCTGGGCCATTACTGTTGGGAAAAATGTTCTTTCTTGTCATGTAGTTGCTGAGCCTGGGATCGGTTCCACTGATTTACTCAACAGGATTAGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAACCGTACAAATTGAGTAG 1128 0.4317 MEHEKNPVLEASSMQEIEITVASEKIDLLPVATESSCSSLCPFSKREHSLQASEESSKSAKKLCGLIVFYAMVMLVEAVGGLKANSLAIISDAAHLLSDTAGFSISLFAVWASGWEATPQQSFGYNRLEVLGALFSVQLIWLISGFLMYEAVGRLFYRKARVNGMLMLSIAALGFSLNLIMVLWLGHDHSHHHHHHSCGDLNHDHGKEELHNNMTDEKELSLVSSSPRKRNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWAKPDWLVVDLICTLIFCVISLGTTVPTLSNIYSILMERTPSEINITKLESDLKGMKGVEDIRDLHIWAITVGKNVLSCHVVAEPGIGSTDLLNRIRHYCEKAHKIHHVTVQIE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0215 375 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 299 IPR027469 -
Prci6g0215 375 Gene3D Cation efflux protein transmembrane domain 59 297 IPR027469 -
Prci6g0215 375 Pfam Cation efflux family 67 298 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Prci6g0215 375 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 25 375 - -
Prci6g0215 375 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 302 375 IPR036837 -
Prci6g0215 375 NCBIfam cation diffusion facilitator family transporter 61 375 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0215 Prci-Chr6 1212800 1214996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0215 1 375 Inorganic Solute Cotransporters AT2G29410 47.804 1.51e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0215 K14689 - gmx:100777590 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0215 6 1212800 1214996 Prci6g0215 6 1212800 1214996 ECH