Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0214 ATGACCAGGTTGTTGAAGCAAATGGAACACGAAAAAAATCCTGTCCTAGAAGCAAGTTCCATGCAGGAGATAGAGATAACGGTTGCCTCTGAAAAAATTGATCTTCTTCCCGTAGCAACTGAGTCATCTTGCAGTTCTCTTTGCCCTTTTTCCAAACGAGAACATAGCCTTCAGGCATCCGAAGAGTCATCAAAGTCGGCAAAGAAACTTTGTGGACTCATAGTTTTCTATGCTATGGTTATGCTTGTAGAAGCTGTTGGTGGCTTGAAAGCCAACAGCCTTGCTATTATCAGTGATGCTGCGCATTTGCTTTCGGATACTGCTGGATTCTCTATCTCTCTATTTGCGGTGTGGGCATCAGGTTGGGAGGCAACACCACAACAGTCTTTTGGATACAATCGGCTTGAGGTTCTGGGTGCTCTTTTTTCTGTTCAGTTAATCTGGCTAATATCTGGCTTTTTGATGTATGAAGCTGTGGGGAGACTTTTTTACAGAAAGGCCAGGGTGAATGGCATGCTCATGCTTTCAATTGCAGCACTTGGATTTTCTCTTAACTTAATTATGGTTTTATGGCTTGGTCATGATCACAGTCACCACCACCACCACCATAGCTGTGGAGACTTAAATCATGATCATGGAAAGGAGGAGCTGCATAATAACATGACTGATGAAAAGGAGCTTAGTCTAGTCTCGAGTAGTCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATCCAATCTGTCGGGGTGATGATTGCTGGAGCTGTAATATGGGCTAAACCAGATTGCATTCTGATGGAGAGGACACCAAGTGAGATCAATATCACGAAGCTGGAAAGTGACCTCAAGGGTATGAAGGGAGTGGAAGACATCCGCGACTTGCACATCTGGGCCATTACTGTTGGGAAAAATGTTCTTTCTTGTCATGTAGTTGCTGAGCCTGGGATCGGTTCCACTGATTTACTCAACAGGATTAGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAACCGTACAAATTGAGTAG 1065 0.4347 MTRLLKQMEHEKNPVLEASSMQEIEITVASEKIDLLPVATESSCSSLCPFSKREHSLQASEESSKSAKKLCGLIVFYAMVMLVEAVGGLKANSLAIISDAAHLLSDTAGFSISLFAVWASGWEATPQQSFGYNRLEVLGALFSVQLIWLISGFLMYEAVGRLFYRKARVNGMLMLSIAALGFSLNLIMVLWLGHDHSHHHHHHSCGDLNHDHGKEELHNNMTDEKELSLVSSSPRKRNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWAKPDCILMERTPSEINITKLESDLKGMKGVEDIRDLHIWAITVGKNVLSCHVVAEPGIGSTDLLNRIRHYCEKAHKIHHVTVQIE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0214 354 Gene3D Cation efflux protein transmembrane domain 66 277 IPR027469 -
Prci6g0214 354 Pfam Cation efflux family 74 271 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Prci6g0214 354 NCBIfam cation diffusion facilitator family transporter 68 271 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Prci6g0214 354 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 275 354 - -
Prci6g0214 354 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 281 354 IPR036837 -
Prci6g0214 354 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 269 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0214 Prci-Chr6 1212800 1215166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0214 8 354 Inorganic Solute Cotransporters AT2G29410 44.186 1.30e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0214 K14689 - gmx:100777590 462.996