Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0185 ATGGACCATGGCAAGACTGGATGTCAAACTCCTCCAGAAGGTCCTATATTGTGCATCAATAACTGTGGATTTCTTGGAAGTGCTGCCACCATGAACATGTGTTCTAAGTGCCATAAAGATATGATGTTGAAACAGGAGCAGGCGCTTGCGGCATCGTCCATTGGGAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTTTTGTTTCTGCGAATGTGAATACCCCAGTCAATTCAGTAGAGCCTAAAACTACATCTGAAGAACCTTGTTTGGCTTCAGGCTCAAAGGAGAGTGGTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAATAGCTGCAATAAGCGGGTTGGTTTGACAGGGTTCAGTTGTCGATGTGGTAACCTTTTCTGCGCCGCACACCGCTACTCGGACAAGCATGATTGCTCCTTTGATTACCGCACTGCTGCAAGGGATGCCATATCTAAAGCAAACCCAATTGTTAAGGCTGAAAAGCTTGGTAAGATTTAG 516 0.4612 MDHGKTGCQTPPEGPILCINNCGFLGSAATMNMCSKCHKDMMLKQEQALAASSIGNIMNGSSSSSGNEPFVSANVNTPVNSVEPKTTSEEPCLASGSKESGEAKPKDGPKRCNSCNKRVGLTGFSCRCGNLFCAAHRYSDKHDCSFDYRTAARDAISKANPIVKAEKLGKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0185 171 MobiDBLite consensus disorder prediction 60 110 - -
Prci6g0185 171 FunFam Zinc finger AN1-type containing 6 83 167 - -
Prci6g0185 171 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Prci6g0185 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Prci6g0185 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Prci6g0185 171 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Prci6g0185 171 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Prci6g0185 171 MobiDBLite consensus disorder prediction 60 94 - -
Prci6g0185 171 SUPERFAMILY AN1-like Zinc finger 97 166 IPR035896 -
Prci6g0185 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Prci6g0185 171 Gene3D - 80 167 IPR035896 -
Prci6g0185 171 Gene3D - 6 67 - -
Prci6g0185 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Prci6g0185 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0185 Prci-Chr6 1045854 1048922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0185 8 171 C2H2 Transcription Factor Family AT3G52800 45.455 2.13e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0185 - - gmx:100802969 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0185 6 1045854 1048922 Prci6g0185 6 1045854 1048922 ECH