Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0177 ATGGAATCTTCCGCTCCACCCTCGCCGGAGCTCCGTCTCGACAACCTCAGATCACTCAAAGTCCTCGGTAAGGGTGGCATGGGCACTGTCTTCCTCGTCCACGACGCCTTGGCCGATCCCTCTGCCCGCTCTCCTTTCGCTCTCAAGGTCCTCGACAAATCCTCCATTAATTCCCACCACACCAACCTCGACGCCGACCGCCGTGCCCGTTGGGAAATCCAAGTCCTCGCTCGCTTGTGCCACCCCTTCCTCCCTTCCCTTCTCGGCACCGTCGAGTCCGACCAGCTTCTCGGTTGGGCTGTTCCTTATTGCCCCGGTGGTGATCTCCACGTCCTCCTTCACCGCCAAGTTGATCGGGTTTTCTCTCCCCCCGTCATTCGCTTCTATTTGGCAGAGATCCTCTGCGCCCTCGACCATCTTCACAGCATTGGCATCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCAGGCCACGTCACTCTGACCGACTTCGATCTCTCTCATAAGCTCAAACCCAAGTCTATCAGAACGGCTATTTCGTCAGCACCAGCTCAAGACAATTTCCCCGAAACCCGCAGTAAAAATCGCCGGAATTTGACGCGGTGGTTCCCTGCCGCATCGGAGAACAAGAAAGGGTTGAAGAAGGCGAAGTCGGCTCGAGTTAGCCCGGTGAGTCGACGGAAACTGAGTTTCTCCAACGGTGAGAAGTCTAACTCGTTCGTGGGCACAGAAGAGTACGTAGCGCCGGAGGTAGTGCGCGGCGACGGTCACGAGTTTGCTGTTGATTGGTGGGCCTTGGGAATATTAGCTTACGAGATGTTATACGGTACGACGCCGTTCAAGGGGAGTAACCGGAAGGAAACTTTTCGGAATGTCCTGTTGAAAACACCGGAATTCATAGGAAAGCGGACGGTACTAACGGATTTGATCGAGCGGTTACTGGAGAAGGATCCCACGAAGCGGTTGGGTTACGTGCGAGGCGCGTGCGAGATCAGGGAGCACGAGTTCTTCAGAGGGGTACGGTGGGACCTACTGACGGAGGTGGTGAGGCCGCCGTTCATTCCACCGAGAGAGGACGGCGGCGACTTGACAGCCAGCGGTAAGGACATAGCCGATTACCTCTGTAGCCTGAAATCGCCTCCGCCGTTCCCTGCCTCGCCGTCTTCTGAGTATCAGAGGAACGTCTCGTACGGAGAATTTTGA 1215 0.5638 MESSAPPSPELRLDNLRSLKVLGKGGMGTVFLVHDALADPSARSPFALKVLDKSSINSHHTNLDADRRARWEIQVLARLCHPFLPSLLGTVESDQLLGWAVPYCPGGDLHVLLHRQVDRVFSPPVIRFYLAEILCALDHLHSIGIAYRDLKPENVLIQQSGHVTLTDFDLSHKLKPKSIRTAISSAPAQDNFPETRSKNRRNLTRWFPAASENKKGLKKAKSARVSPVSRRKLSFSNGEKSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGSNRKETFRNVLLKTPEFIGKRTVLTDLIERLLEKDPTKRLGYVRGACEIREHEFFRGVRWDLLTEVVRPPFIPPREDGGDLTASGKDIADYLCSLKSPPPFPASPSSEYQRNVSYGEF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0177 404 Gene3D Transferase(Phosphotransferase) domain 1 108 178 - -
Prci6g0177 404 MobiDBLite consensus disorder prediction 383 404 - -
Prci6g0177 404 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0177 404 Gene3D Phosphorylase Kinase; domain 1 17 107 - -
Prci6g0177 404 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0177 404 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Prci6g0177 404 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Prci6g0177 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Prci6g0177 404 PANTHER FLIPPASE KINASE 1-RELATED 10 361 - -
Prci6g0177 404 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Prci6g0177 404 SUPERFAMILY Protein kinase-like (PK-like) 13 392 IPR011009 -
Prci6g0177 404 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0177 404 Pfam Protein kinase domain 18 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0177 404 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0177 Prci-Chr6 1001374 1002917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0177 7 388 AGC Kinase Gene Family AT1G51170 61.168 6.35e-159 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci6g0177 Pkinase 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0177 - - qsa:O6P43_000123 598.971