Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0128 ATGGGAGGCTGCATATCCACGCCAGGCAAGACATTCCCTCGCAGGAGGTCCAAGGACGGCGCCAAGTCATCCACGCCCAAATCGGGCTCCCTCGCGCCGCCGCCGACGCAGAAAGCCCTCAACATCCGCCCCATCAACGTTATCGAGGACCCGGCACCCGACGACATCTTTGAAAAGTACGAGTTTGGCAAAGAACTCGGGCGCGGCGAGTTCGGCGTGACATCCAGATGCGTGGAGATTGAGACCGGGAAGGCGTTCGCGTGCAAGAAGATCGCCAAGACGAAGCTTCGCACGGAGATTGACATCCAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCATTTGCCAAAGCATCCCAATATTGTGAGCTTCAAGGAGGCTTACGAGGACAAGGATGCTGTGTATCTCGTCATGGAACTTTGTGAAGGAGGCGAGCTTTTTGACAGAATCGTCTCCAAGGGCCATTACACAGAACGTGCCGCCGCTAACGTTATCAAGACAATTCTTGAGATTTGCAAGGTATGCCAGGAGCACGGGGTGATGCATAGGGACTTGAAGCCAGAAAATTTCTTATTTGGAGATGCAAGCGAGTCTGCTCCCGTGAAGGCAATTGATTTCGGGCTTTCTACCTTTTATGAATCTGGGCAGAGGTTTAATGAAATTGTTGGAAGTCCCTATTACATGGCTCCAGAAGTCTTGAGACGTAACTATGGACCAGAAATTGATGTGTGGAGCGCCGGCGTGATCCTTTATATTTTACTTTGCGGGGTTCCACCCTTTTGGGCAGAATCCGAGGAAGGGATAGCGCAGGCAATTATCCGGGGAAACATCGATTTTGAAAGAGATCCTTGGCCTAAGGTTTCAGAAGGAGCAAAAAATCTGGTTAAAAACATGCTTGATCCAAATCCATACAGCCGATTAACTAGTCAAGAAGTTCTCGAACATCCGTGGATACAGAACAGAGACCAAGGTCCAAATGTTTATCTCGGAGACCATGTACGAATGAGAATCAAGCAATTTTCCTTGATGAACAAGTTCAAGAAGAGAGTTCTTAGAGTGGTGGCAGACAGCCTCCCAATTGAGCAAATAGATCGGATCAAGCAGATGTTCCATATGATGGACAAGGATAAAAATGGAAACTTGTCGTTTGAAGAGCTCAAAGATGGTCTTTCTAGAATTGGACACCCTCTTCCTGATCCTGACGTGCAGATGTTATTGGACGCAGCAGATACAGATGGAAATGGCACACTGAATTGTGAAGAGTTCATCACGATGAATGTCCATCTGGGAAAGATTGGAAGTGACGAGCATCTCTCGGAAGCTTTTTGTTACTTTGACAAGAATAACAGTGGTTTTGTGGAATTTGATGAATTGAGAGATGCCTTGTTGGATGATGACTTAGGTCCCTGTAATGACCAGGTGGTCCATGACATCCTATTTGAAGTCGACTTGGACAAGGACGGTCGAATCAGTTATGAGGAGTTCAAGGCAATGATGAAGACAGGACCAGATTGGAAAATGGCTTCTCGCCAATATTCAAGAGCAATGCTAAATGCGTTAAGCTTCAAAATGTTCAATAACAAATCTGTGAAATGTGCCTAA 1602 0.4694 MGGCISTPGKTFPRRRSKDGAKSSTPKSGSLAPPPTQKALNIRPINVIEDPAPDDIFEKYEFGKELGRGEFGVTSRCVEIETGKAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPKHPNIVSFKEAYEDKDAVYLVMELCEGGELFDRIVSKGHYTERAAANVIKTILEICKVCQEHGVMHRDLKPENFLFGDASESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEGAKNLVKNMLDPNPYSRLTSQEVLEHPWIQNRDQGPNVYLGDHVRMRIKQFSLMNKFKKRVLRVVADSLPIEQIDRIKQMFHMMDKDKNGNLSFEELKDGLSRIGHPLPDPDVQMLLDAADTDGNGTLNCEEFITMNVHLGKIGSDEHLSEAFCYFDKNNSGFVEFDELRDALLDDDLGPCNDQVVHDILFEVDLDKDGRISYEEFKAMMKTGPDWKMASRQYSRAMLNALSFKMFNNKSVKCA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0128 533 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Prci6g0128 533 ProSiteProfiles Protein kinase domain profile. 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0128 533 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Prci6g0128 533 Pfam EF-hand domain pair 378 425 IPR002048 GO:0005509
Prci6g0128 533 SMART serkin_6 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0128 533 MobiDBLite consensus disorder prediction 1 38 - -
Prci6g0128 533 SMART efh_1 365 393 IPR002048 GO:0005509
Prci6g0128 533 SMART efh_1 437 465 IPR002048 GO:0005509
Prci6g0128 533 SMART efh_1 474 502 IPR002048 GO:0005509
Prci6g0128 533 SMART efh_1 401 429 IPR002048 GO:0005509
Prci6g0128 533 CDD EFh 437 500 IPR002048 GO:0005509
Prci6g0128 533 CDD STKc_CAMK 59 317 - -
Prci6g0128 533 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Prci6g0128 533 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Prci6g0128 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 495 - -
Prci6g0128 533 Pfam EF-hand domain pair 436 500 IPR002048 GO:0005509
Prci6g0128 533 SUPERFAMILY EF-hand 347 513 IPR011992 -
Prci6g0128 533 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Prci6g0128 533 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Prci6g0128 533 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Prci6g0128 533 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Prci6g0128 533 FunFam calcium-dependent protein kinase 13 146 326 - -
Prci6g0128 533 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Prci6g0128 533 Gene3D - 327 501 - -
Prci6g0128 533 FunFam Calcium-dependent protein kinase 1 62 145 - -
Prci6g0128 533 SUPERFAMILY Protein kinase-like (PK-like) 56 325 IPR011009 -
Prci6g0128 533 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Prci6g0128 533 CDD EFh 365 425 IPR002048 GO:0005509
Prci6g0128 533 Gene3D Transferase(Phosphotransferase) domain 1 146 326 - -
Prci6g0128 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Prci6g0128 533 Pfam Protein kinase domain 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0128 533 FunFam Calcium-dependent protein kinase 7 327 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0128 Prci-Chr6 765231 768962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0128 1 525 EF-hand Containing Proteins AT2G31500 69.663 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci6g0128 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0128 K13412 - gmx:100801716 827.009