Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0107 ATGGAGTTTGGAATTGATGGCTCTATTCATGGTGAGACAGTAGGAAATGCTATCGTGAGGGATGTTAGCTGTATAGAGGATGAAATCAAAACAGGTGGTAGTTCAGTTGAACCAACTTATAAACAGGATCAAAGTGATACACAGGCTCAAGATTCTTCTGGGGGGGATACAATTCCATCAGCAGTTCCTGCAGTATCAGTTTTTTCAGCTGAGGAGCCCTATGTGGGTCAAGAGTTTGAGTCTGAAGCAGCAGCGCATGCTTTTTATAATGCATATGCCACAAATGTTGGATTTGTCATACGTGTAAGTAAACTCTCTCGATCAAGACGTGATGGGTCTGCTATTGGACGGGCACTTGTTTGCAATAAAGAGGGTTATAGAATGCCTGACAAGCGCGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGCTGCAGGGCGATGATTTTGGTCAGGAAAGTAAGTTCTGGTAAATGGGTAGTTACAAAGTTTGTTAAAGAGCACACACATCCTTTGACACCAGGAAAAGGTAGAAGGGATTGCATTTACGAACAATATCCGTTTTCTAATGCTGTTTGCAGAATGAACATGATAAAATTCGGGAACTCTCCCAGCAGTTGA 624 0.4263 MEFGIDGSIHGETVGNAIVRDVSCIEDEIKTGGSSVEPTYKQDQSDTQAQDSSGGDTIPSAVPAVSVFSAEEPYVGQEFESEAAAHAFYNAYATNVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPFSNAVCRMNMIKFGNSPSS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0107 207 Pfam FAR1 DNA-binding domain 88 174 IPR004330 -
Prci6g0107 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 175 - -
Prci6g0107 207 MobiDBLite consensus disorder prediction 33 57 - -
Prci6g0107 207 MobiDBLite consensus disorder prediction 35 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0107 Prci-Chr6 655514 660352 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci6g0107 FAR1 1.1e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0107 - - gmx:100806900 295.434