Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0098 ATGAAAATCCAGTGCGATGTGTGTGAGAAAGCTCCAGCAACTGTGATTTGTTGCGCCGATGAGGCCGCTTTATGTGCTAAATGCGACATTGAAGTTCATGCTGCCAACAAGCTAGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTGTCTACCAAGCTTCCCACATGTGACATCTGCCAAGACAAGCCGGCTTTTATATTTTGTGTTGAAGACAGAGCGCTGTTCTGTGAAGCTTGTGATGAACCGATTCATTCAGCTGGCAGCCTTTCTGCAAACCACCAGCGCTTCCTTGCAACTGGTATCCGGGTGGCTTTGAGCTCCAACTGCTCCAAGGACAATGAAGAACGTCGCTTAGAGCCACCTAATCGGAGTGCACAACAAGCTTCTGCAAAAATCCCCCCTCAGCCTCAGCAAGTCCCAACCTTCGCATCACCTTGGGCTGTGGATGACTTGTTGGAATTCACTGACTTCGAATCTCCTGAAAAGGCAAAATCACTCGAGTTTGGAGAGCTGGAATGGTTATCGGAGGTGGGTCTCTTCGGGGAACAATTTCCTGGGGAGGCATTGGCTGCTGCTGAAGTCCCTCAACTTCCAGTCACACAAATTAGCAATGTTGCCTCATACAGACCCTCTAAGTCCCTCATGTCTCTCAAGAAGCCGAGGATTGAATTTGAAGATGATGATGAACACTTCACCGTGCCTGATCTTGGTTGA 717 0.4937 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSTKLPTCDICQDKPAFIFCVEDRALFCEACDEPIHSAGSLSANHQRFLATGIRVALSSNCSKDNEERRLEPPNRSAQQASAKIPPQPQQVPTFASPWAVDDLLEFTDFESPEKAKSLEFGELEWLSEVGLFGEQFPGEALAAAEVPQLPVTQISNVASYRPSKSLMSLKKPRIEFEDDDEHFTVPDLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0098 238 CDD Bbox1_BBX-like 5 47 - -
Prci6g0098 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 237 - -
Prci6g0098 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Prci6g0098 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Prci6g0098 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci6g0098 238 MobiDBLite consensus disorder prediction 112 139 - -
Prci6g0098 238 Gene3D Classic Zinc Finger 1 95 - -
Prci6g0098 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Prci6g0098 238 CDD Bbox1_BBX-like 57 98 - -
Prci6g0098 238 MobiDBLite consensus disorder prediction 123 138 - -
Prci6g0098 238 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0098 Prci-Chr6 620499 622557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0098 1 163 Orphan Transcription Factor Family AT1G06040 65.294 9.03e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Prci6g0098 zf-B_box 6.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0098 - - gmx:100797515 400.593