Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0037 ATGACGGCTAGCTCCTTCTGCAATGCTGACTCTGTGTTTTCGAGAGAAGAAGGTGTAGATATTAGAAAGATGATGGAACCGAAAAGGAGCTTCTGCTCTGTGGATCAAAGCAATTATACCTCTATTGCATCCAAAAGACAAAAGGCTGATTTATCCATTTCCACAAAGGAGAGAAAGGAGAAGATTGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCACCATTTGGGAAGTCAGATACAGCTTCTGTCCTTTTAGAGGCAACGCACTACATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAACCAAAACGCAGGATATAGGGATTGGGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTACCAGTGTCGTATACGATTGGAGTTGCTCAGAGTAATGGTGCGGATATATGGGCCCCCACCAAAAGCACACCGTCACAATTTGCCTAG 486 0.4506 MTASSFCNADSVFSREEGVDIRKMMEPKRSFCSVDQSNYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPTTKTQDIGIGAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTPSQFA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0037 161 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 138 - -
Prci6g0037 161 Gene3D - 43 115 IPR036638 GO:0046983
Prci6g0037 161 FunFam Transcription factor bHLH113 family 45 120 - -
Prci6g0037 161 SMART finulus 52 101 IPR011598 GO:0046983
Prci6g0037 161 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Prci6g0037 161 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 110 IPR036638 GO:0046983
Prci6g0037 161 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0037 Prci-Chr6 318806 326628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0037 24 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.712 1.19e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0037 - - pcin:129312787 318.161