Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0036 ATGACGGCTAGCTCCTTCTGCAATGCTGACTCTGTGTTTTCGAGAGAAGAAGGTGTAGATATTAGAAAGATGATGGAACCGAAAAGGAGCTTCTGCTCTGTGGATCAAAGCAATTATACCTCTATTGCATCCAAAAGACAAAAGGCTGATTTATCCATTTCCACAAAGTCAGATACAGCTTCTGTCCTTTTAGAGGCAACGCACTACATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAACCAAAACGCAGGATATAGGGATTGGGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTACCAGTGTCGTATACGATTGGAGTTGCTCAGAGTAATGGTGCGGATATATGGGCCCCCACCAAAAGCACACCGTCACAATTTGCCTAG 420 0.4452 MTASSFCNADSVFSREEGVDIRKMMEPKRSFCSVDQSNYTSIASKRQKADLSISTKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPTTKTQDIGIGAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTPSQFA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0036 139 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 116 - -
Prci6g0036 139 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 88 IPR036638 GO:0046983
Prci6g0036 139 CDD bHLH_AtbHLH_like 54 81 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0036 Prci-Chr6 318806 326633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0036 24 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 50.000 1.72e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0036 - - pcin:129312787 264.233