Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0035 ATGATGGAACCGAAAAGGAGCTTCTGCTCTGTGGATCAAAGCAATTATACCTCTATTGCATCCAAAAGACAAAAGGCTGATTTATCCATTTCCACAAAGGAGAGAAAGGAGAAGATTGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCACCATTTGGGAAGTCAGATACAGCTTCTGTCCTTTTAGAGGCAACGCACTACATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAACCAAAACGCAGGATATAGGGATTGGGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTACCAGTGTCGTATACGATTGGAGTTGCTCAGAGTAATGGTGCGGATATATGGGCCCCCACCAAAAGCACACCGTCACAATTTGCCTAG 417 0.4532 MMEPKRSFCSVDQSNYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPTTKTQDIGIGAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTPSQFA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0035 138 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Prci6g0035 138 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 87 IPR036638 GO:0046983
Prci6g0035 138 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Prci6g0035 138 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 115 - -
Prci6g0035 138 SMART finulus 29 78 IPR011598 GO:0046983
Prci6g0035 138 Gene3D - 20 92 IPR036638 GO:0046983
Prci6g0035 138 FunFam Transcription factor bHLH113 family 22 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0035 Prci-Chr6 318806 326639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0035 1 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.712 7.07e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0035 - - pcin:129312787 273.478