Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0023 ATGGGAAAGAAGGGAAGTTGGTTTTCCGCTATCAAGAGAGTTTTCAGTCACCATTCCAAGGAAAAGGTAGTCAATGATTCTGAAAAGAAAACCACAAAAGAAAAGAAGAAAGGTCTTGGAAAACTAAGGCATGGAGAGACAAATTCATTCATTCCCCTCTTCAGGGAGCCTAGCAGCATTGAAAAAATCTTTGGGGATTTTGAAAGAGAGCAACAATTACTAACTTTCAGGCCTCACACACCTCCTGAGCTGCCCAAAACACCGCCTTTTGTGCCTCTCAGAGCTGCTTCTCCTAGGGCTCCTTCACCAAAGACTGCTTCTCCAAGGGCTCCTTCTCCAAAGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATCGTTCATCATCATAGACCAGAACCAACGCTAAGGAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCATATAGAGGTTATATGGCTAGGAGGAGTTTTAGAGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAAACCATGAATGCCATGAAATACATGCAGTTGTTGGTTCGGGTTCAATCTCAGATTCAATCCCGGAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTACAAGAATGATAAAGAAGTGGCAAGTACCTTGGGCAAGTTGACTTTAGGCCATGGATCTGAAGCAGGTAACAATGAAGATTGGGATGACAGCTTACTGACGAAAGATGAAATAGAGGCAAGGCTGCAGAGGAAGGTACAAGCAATCATCAAAAGAGAGAGAGCAATGGCATATGCATATTCCCATCAGTTGTGGAAAGCCACTCCCACATCAACACACACACTGGGGTCAGATATGCGATCCGGGGGATTTCCATGGTGGTGGACCTGGTTGGAACGGCAGCTGCCCTCAGCAAATCCACAAGGAGGCCAGGTCTTGAAGAATTTTCAACTTACACCTCCCAGACCATATTCTGAACAGAAGACTAGTCCACAACCTGCCTCAAGCACCCATAAGCAGCACCGCTATGCGTTAGATAATATGGATACAGCCACACCAAAATCCAGTAAATCGGCTGTAGTGTCGTCCGCAAAACCAGCTAGAACCCCACAAGCAAACAGCTCGAGCTTGCCAAAGTATTCGAGAGCAAGGGTGGGGGGGACTGATTCACCTTTTGATGTGCCACTCAGGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCGAACTACATGGCTCCAACTCTATCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATGCAAGAGAAAGTTTTCCCGGGACTCCTAACTCTGAATCAAAGAGGCGACTTTCATTTCCTCTTACGCAAGGAATTGGATCCTTTAAATGGACAAAAGGTTCCTTGTTCCCGAGCAAGGATCCTAGGTCCCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACGGTGTCTTTACCCGCAGGGGTCGGAAGGAAGCCGTTTAACAGATTTGCGTGA 1554 0.4685 MGKKGSWFSAIKRVFSHHSKEKVVNDSEKKTTKEKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLTFRPHTPPELPKTPPFVPLRAASPRAPSPKTASPRAPSPKVASPRAASPRRIVHHHRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASTLGKLTLGHGSEAGNNEDWDDSLLTKDEIEARLQRKVQAIIKRERAMAYAYSHQLWKATPTSTHTLGSDMRSGGFPWWWTWLERQLPSANPQGGQVLKNFQLTPPRPYSEQKTSPQPASSTHKQHRYALDNMDTATPKSSKSAVVSSAKPARTPQANSSSLPKYSRARVGGTDSPFDVPLRDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNARESFPGTPNSESKRRLSFPLTQGIGSFKWTKGSLFPSKDPRSQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0023 517 Pfam Protein of unknown function (DUF4005) 362 463 IPR025064 -
Prci6g0023 517 Gene3D - 137 191 - -
Prci6g0023 517 Pfam IQ calmodulin-binding motif 140 160 IPR000048 GO:0005515
Prci6g0023 517 SMART iq_5 138 160 IPR000048 GO:0005515
Prci6g0023 517 MobiDBLite consensus disorder prediction 469 489 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 76 141 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 357 389 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 314 349 - -
Prci6g0023 517 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Prci6g0023 517 PANTHER IQ-DOMAIN 5-RELATED 1 459 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 434 454 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 81 96 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 314 407 - -
Prci6g0023 517 MobiDBLite consensus disorder prediction 18 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0023 Prci-Chr6 269590 276676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0023 1 517 IQD Protein Family AT3G59690 52.857 2.23e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0023 - - qsa:O6P43_000027 753.436