Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0015 ATGCCCACAGCTCACGACAACATTCTCTGTCTCCTCTCCCTTCTCTTCTCCCTCACAGTCACGCCCACTCTGTCTTCCTCCGCCGCTCGCCGGCTCCTCCATCAACCATTTTTCCCCAAGGATTCCATCCCTCCCGGCAAGATTCCCTTTTCGTCTCCTTCGTCCCCCTCTCCAACTCCAAGCCCAACACCCAAGGCTTTTTTCCCTTCTTACAATTCCCCACCAATCCCTCCTCCTCACCCTGCTCTCACCACATTTCCAGCTAACATCTCCTCCCTTCTCTTCCCCCGACCCTCTTCCCTCCACCGGCCCCCCGTCATCGCCATCGCTATCTCTGTCTCCCTGCTCTCCGCAGCTCTTGTCGCCCTTCTTGTCTTCTTCATTTACTACTGTAAATACACCACTGCCAACAAGGCTTCAAGATCTGACAGTCTCCGATTATACCCCCCGAACACTCTGACTTTCGATGCTATTGGTAGTCATAAGCCTCGCTCAGCATCAGGCCACAGCGCTGGCACCAGCTCGGAATTTCTCTATCTGGACAATGTGTTAAATTCACGAGAAGCTTGTGCTACAAGTGCTATGTATTCTGGCAACGGTAGGCTGAGTATGGGCAATTCTACCTCACCATATCGAAGACTGAGGTCGCCCGAACTCAAACCGCTTCCGCCATTGCCGCGTGACAGAAACAGGGGGAATTGCGAAGATGATGAAGAAGAGGAGTTCTTCTCTCCAAAAGGGTCTTTAGGCCGCAGACTGAGTCCTGTGCGTACTGGGTCAGGGAGAGTGCTTCGGTTGGGAATGGATAAACTTGGGTTTGGGAGTACAAGCTTCGATTCAAGAACACCTTCTCCCCCTTGCTCAAATTCTGCATCGCTCACTTCTTCCCCTTGTTTGAATTTGAGTCGTAGGCATTCTTTGGAGCTTCAGCGCCCCATGACATCCTCCTCACCGTCTTCACCGGAGATTAACTGGAATTTTCCAGTCTCAGAACAGAGGGATAATTCTGAGGCCACAATTGAGGTAAATGTTCCGATCAAGAAGCCCCCATATCCTCCGCCGCTTCCGCCTCCACGCTTTTGGGAAGCATCTCCGAATGACAATGCGGAGGCTCGAAAGCCAAAGTTGAAACCTTTACACTGTGAAAAAGTCAGGGCCAGCTCGGATCGGGCCATGGTTTGGGATCAGTTAAAACCGTGTTCTTTCCAATTGAACGAGGAAATGATAGAGACGCTTTTTATGGTGAATAACACCTCAAACTTCACTCTTAGAGATAATGCCGGGCGTCAAAACGTTGCTTCTCCCCCCTTGGAATACAGGTTGCTTGACCCTAAGAAGTCTCACAACATCTCCATTTTGCTGAGGGCACTCAATGTGACTATTGATGACGTATGCGATGCCCTCAAGGAGGGCAATTGGGATATGTTGGGAACAGAACTTCTAGAAAGTTTGTTAAAGATGGCTCCAACCAAAGATGAAGAATGTAAGCTGAAGGAGTTCAAAGATGAATCAGCCTCCAAGCTTGCTCCTGCTGAGAAATTTCTTAAAATCGTGCTTGATATTCCTTTTGCATTTAACAGAGTTGACGCAATGCTTTACATTGCCAACTTCGATTCCGAATCAGAATACCTTAGGAAGTCCTTTGAGACTTTGGAGGTGGCTTGGGAACTAAGGAATAGCAGAATGTTTTTGAACCTCCTTGAAGCAGTGCTAAGAACTGGCAATCGCTTGAACGTTGGCACCAATCGTGGTGATGCATATGCATTCAAGCTGGACACTCTTCTGAAGCTTGTTGATGTTAAAGGGGCTGATGGAAAGACTACTTTGTTGCATTTTGTTGTGCAGGAAATGGTCAGAATTGAAGGTTCTCGGATATCTGGTGCTTCTAACAATCACCAAACTGCTGAAAAGATCCTCCAGTCTACACTCCAGGATGAAGTTGAATTTAGGAAACTTGGACTCCAAGTTGTTTCAGGTTTGAGTGGGGAGCTCTGCAATGTAAAAAAAGCAGCTGCAATGGATTCAGATATGCTTAGCAGTGATGTCTCTAAGCTTGCCAGAGGGATTGCAACAGTTGCGGAGGTTATAAAATTGAATGGAGAGTCACCATCGAGAGAAATTAGCCAAAAATTTTCGGAGGCAATGAAAGGTTTCTTGAAGAAGGGAGAGAAGGAAATTGTTTCGATTCAGGCCCAAGAGAAGAATGCTTTCTCTTCAGTGAAGAAGCTAACGGAGTATTTCCATGGAAATTCTTCCAAGGAAGGAGCTCATCCGTTTAGGATTTTTATGGTCGTGAGGGATTTCCTCTCATTACTTGATCGCGTGTGCAAGGAAGTTGGAAAGGTAAACGAGAGAACTTTAGTAGGTTTCCTTCAATACTCAGAGCCTTCAAATCCCTTCCTGCTACAAATTTTCCCTGAGATTGTTGGTTCCTTGGATGATTAA 2445 0.4708 MPTAHDNILCLLSLLFSLTVTPTLSSSAARRLLHQPFFPKDSIPPGKIPFSSPSSPSPTPSPTPKAFFPSYNSPPIPPPHPALTTFPANISSLLFPRPSSLHRPPVIAIAISVSLLSAALVALLVFFIYYCKYTTANKASRSDSLRLYPPNTLTFDAIGSHKPRSASGHSAGTSSEFLYLDNVLNSREACATSAMYSGNGRLSMGNSTSPYRRLRSPELKPLPPLPRDRNRGNCEDDEEEEFFSPKGSLGRRLSPVRTGSGRVLRLGMDKLGFGSTSFDSRTPSPPCSNSASLTSSPCLNLSRRHSLELQRPMTSSSPSSPEINWNFPVSEQRDNSEATIEVNVPIKKPPYPPPLPPPRFWEASPNDNAEARKPKLKPLHCEKVRASSDRAMVWDQLKPCSFQLNEEMIETLFMVNNTSNFTLRDNAGRQNVASPPLEYRLLDPKKSHNISILLRALNVTIDDVCDALKEGNWDMLGTELLESLLKMAPTKDEECKLKEFKDESASKLAPAEKFLKIVLDIPFAFNRVDAMLYIANFDSESEYLRKSFETLEVACXELRNSRMFLNLLEAVLRTGNRLNVGTNRGDAYAFKLDTLLKLVDVKGADGKTTLLHFVVQEMVRIEGSRISGASNNHQTAEKILQSTLQDEVEFRKLGLQVVSGLSGELCNVKKAAAMDSDMLSSDVSKLARGIATVAEVIKLNGESPSREISQKFSEAMKGFLKKGEKEIVSIQAQEKNAFSSVKKLTEYFHGNSSKEGAHPFRIFMVVRDFLSLLDRVCKEVGKVNERTLVGFLQYSEPSNPFLLQIFPEIVGSLDD 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0015 815 Gene3D Formin, FH2 domain 361 784 IPR042201 -
Prci6g0015 815 Pfam Formin Homology 2 Domain 370 773 IPR015425 -
Prci6g0015 815 MobiDBLite consensus disorder prediction 222 236 - -
Prci6g0015 815 MobiDBLite consensus disorder prediction 201 256 - -
Prci6g0015 815 PANTHER FORMIN-RELATED 13 799 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci6g0015 815 MobiDBLite consensus disorder prediction 44 79 - -
Prci6g0015 815 SUPERFAMILY Formin homology 2 domain (FH2 domain) 349 786 - -
Prci6g0015 815 SMART it6_source 366 788 IPR015425 -
Prci6g0015 815 MobiDBLite consensus disorder prediction 346 361 - -
Prci6g0015 815 MobiDBLite consensus disorder prediction 344 372 - -
Prci6g0015 815 MobiDBLite consensus disorder prediction 275 293 - -
Prci6g0015 815 ProSiteProfiles Formin homology-2 (FH2) domain profile. 366 799 IPR015425 -
Prci6g0015 815 MobiDBLite consensus disorder prediction 49 79 - -
Prci6g0015 815 MobiDBLite consensus disorder prediction 273 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0015 Prci-Chr6 171670 175726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0015 82 815 FH2 protein (formin) Gene Family AT2G43800 47.506 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0015 - - qsa:O6P43_000015 821.231