Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci693g0001 ATGGAGGAGACGAGGAAGTTCGTGTGCAAGTTCTGCAGCAAGAGGTTCCCTAGTGGCAAGTCTCTGGGCGGTCACATTAGAACTCACCTGAATCAACATTCAAGCAATAAGACCATTACTGCTAACAATCCAGGCAAGTTCGGGATCAGTAACAATGGGTTGATGCTGCAAGAAAAAGAAGAGGAAGGAGAGAGATTTAAGCTCAGATTATGGCCTCAGAGAGAATCCCAGAACGACAAAGAGAGAATGTGGGAAAGGATTCCCTTCTTTGAAGCTCTATGTGGTCACATGGCTTGTCACTCTGAGAAAGAGAAGCAGAAATTGGCAATCATGGATTCTCAATCTGATACTGAAGCTTCTGATCTAGAAGATTTCAAGAGAACCAGGTTCATGACCCTTAACAATAATCAAAGTAACCTAACTTCTTCTTCTTTGTCAGAGGTTGAACAAGAAGAAGATGATGATGATGATGGAGAAGTCAAGAATAAGAACTCTGTCTATAATGCTTCTCAGCTTGTGAAGGTGGGAAAGGACAAGATGAAGTCGAAGTTTTCAGATTCTGGGTGTTCTAGAAATGGTTCCAAAAAGGAAGATTCAAATATTTCAATTGATGGGGTTTTCAGGAATGATGGTTTTAATCGACCAAAAGTGGAAGATGAATATGGATTTAAGATGATTGCCAAACATGAAAATCTTAGTCACAATTTGGATGAAGTTTCCTGCAAGAAGAAGAAAAAAAGTTTTCCTAATGATGAAGACTACAACAAAGACTCATATGATTCAGAATCTTATGCAAGTGCTGAGAAAAGCACAGACACTGACTCTGATTCTTTTCCTTATTCTTATCAGAAGCCAAAGAGCAGCAAGAGTAGTAACACAAGGCCAAGAAGAAGTGATGAGAAATCAAAGAAAACAAAGGAGCATGAGTGTCCCATCTGTAACAAAACTTTCAGGTCAGGCCAAGCCTTGGGAGGTCACAAAAGGTCCCATTTTATTGGGGATTTGAAGAGAACCACAACAACACCACTGGAATAG 1035 0.401 MEETRKFVCKFCSKRFPSGKSLGGHIRTHLNQHSSNKTITANNPGKFGISNNGLMLQEKEEEGERFKLRLWPQRESQNDKERMWERIPFFEALCGHMACHSEKEKQKLAIMDSQSDTEASDLEDFKRTRFMTLNNNQSNLTSSSLSEVEQEEDDDDDGEVKNKNSVYNASQLVKVGKDKMKSKFSDSGCSRNGSKKEDSNISIDGVFRNDGFNRPKVEDEYGFKMIAKHENLSHNLDEVSCKKKKKSFPNDEDYNKDSYDSESYASAEKSTDTDSDSFPYSYQKPKSSKSSNTRPRRSDEKSKKTKEHECPICNKTFRSGQALGGHKRSHFIGDLKRTTTTPLE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci693g0001 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 308 330 IPR013087 -
Prci693g0001 344 ProSitePatterns Zinc finger C2H2 type domain signature. 310 330 IPR013087 -
Prci693g0001 344 MobiDBLite consensus disorder prediction 234 344 - -
Prci693g0001 344 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 337 - -
Prci693g0001 344 MobiDBLite consensus disorder prediction 270 289 - -
Prci693g0001 344 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Prci693g0001 344 SMART c2h2final6 308 330 IPR013087 -
Prci693g0001 344 SMART c2h2final6 7 29 IPR013087 -
Prci693g0001 344 MobiDBLite consensus disorder prediction 292 313 - -
Prci693g0001 344 Gene3D Classic Zinc Finger 1 64 - -
Prci693g0001 344 MobiDBLite consensus disorder prediction 181 203 - -
Prci693g0001 344 MobiDBLite consensus disorder prediction 136 167 - -
Prci693g0001 344 MobiDBLite consensus disorder prediction 234 269 - -
Prci693g0001 344 SUPERFAMILY beta-beta-alpha zinc fingers 5 330 IPR036236 -
Prci693g0001 344 Pfam C2H2-type zinc finger 7 30 - -
Prci693g0001 344 Pfam C2H2-type zinc finger 308 330 - -
Prci693g0001 344 MobiDBLite consensus disorder prediction 181 211 - -
Prci693g0001 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Prci693g0001 344 Gene3D Classic Zinc Finger 280 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci693g0001 5 341 C2H2 Transcription Factor Family AT1G26610 33.333 2.01e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci693g0001 zf-C2H2_6 8.8e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci693g0001 - - pcin:129298070 665.611