Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci68g0018 ATGTTCATATTGAACAAGCTAGTGAAATTTAGTCTTTGTATTAAGCTCGGAAGTTTCATGCAAACAACCTTGCTTTTATTGTTTACAAATTCCTTGCTTGTTGAGAATGGAAAGTTTCTGCTCTCTGCTAAACGGACTAGACGAACAACTTGCAGAGAGTACATTATATCCATGGATGCTGATAGCATATCAAGATCTAGTAGCACTTATATTGGGAAGCTGAGGTCAAATTTTCTGGGCACCAAATTCCTAATATATGATACACAGCCTCCCTATAATTTTGCTCAGCTGCCTCCTCCTTCGCCTAGCCAAAGCCGTCGATTCTATTCTAGAAAGGTTTCTCCAAAAGTCCCCAGCGGCAGCTACAATATTGCTCAGGTCATCTATGAGCTGAATGTGCTTGGTACAAGAGGCCCACGCAAGATGAACTGCACCATGTGCTCGATCCCAGAATCAGCCCTGGAGCCTGCTGGCACTGTCCCAGGCCAGCCAGAACTCATTCCTTGTGCCATGGATGACTCGTTCCGGAGTACATCCTTTTCAAAATCGATCCGCAGTTCATCCAATTTTAGCAGCTCTAGGTTCTCAGACATCATGTGGACCGGCAACGAAGGAGAGAGTGGCGAGGTAAAAGAGAGGCCACTAATTCTCAAGAACAAGGCTCCAAGATGGCATGAGCAGCTGCAATGTTGGTGCCTTAACTTCCGGGGCAGAGTGACTGTGGCCTCCGTCAAGAATTTCCAGCTGATTGCCGCTGTGCAGCCTGCAGCCGGTGCTCCAATGCCGGCACAGCGTGGCCCGGCAGATCACGACAAGGTTATTCTTCAGTTTGGCAAGGTAGGCAAGGATTTGTTCACCATGGACTATCGATATCCCCTGTCGGCATTCCAGGCTTTTGCCATATGCTTGACTAGCTTTGACACTAAACTAGCATGTGAATAG 942 0.4724 MFILNKLVKFSLCIKLGSFMQTTLLLLFTNSLLVENGKFLLSAKRTRRTTCREYIISMDADSISRSSSTYIGKLRSNFLGTKFLIYDTQPPYNFAQLPPPSPSQSRRFYSRKVSPKVPSGSYNIAQVIYELNVLGTRGPRKMNCTMCSIPESALEPAGTVPGQPELIPCAMDDSFRSTSFSKSIRSSSNFSSSRFSDIMWTGNEGESGEVKERPLILKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAVQPAAGAPMPAQRGPADHDKVILQFGKVGKDLFTMDYRYPLSAFQAFAICLTSFDTKLACE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci68g0018 313 Gene3D Tubby Protein; Chain A 10 307 IPR025659 -
Prci68g0018 313 PRINTS Tubby superfamily signature 70 94 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 54 70 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 217 234 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 235 251 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 270 289 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 121 148 IPR000007 -
Prci68g0018 313 PRINTS Tubby superfamily signature 291 313 IPR000007 -
Prci68g0018 313 Pfam Tub family 27 308 IPR000007 -
Prci68g0018 313 PANTHER TUBBY-RELATED 22 311 - -
Prci68g0018 313 ProSitePatterns Tub family signature 2. 298 313 IPR018066 -
Prci68g0018 313 SUPERFAMILY Tubby C-terminal domain-like 20 313 IPR025659 -
Prci68g0018 313 ProSitePatterns Tub family signature 1. 235 248 IPR018066 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci68g0018 18 313 TUB Transcription Factor Family AT1G43640 62.338 1.28e-128 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Prci68g0018 Tub 8.3e-102 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci68g0018 K19600 - mof:131161977 431.409