Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci689g0001 ATGTTTTCATTCAACTGTTCTTCACACCCGCATCCGCTTAGGTCGCAATATAATTGTGATTTAGAAGTGCTAGAGTACACGTCGTCGCCGGCTTCGGATTGTGGAAGTGGCAGCGGAGTTCCTTCGTTGTTTCTGTCCGACGAGGAGGTGTTGCTGGCTGCAACTCATCCGAAGAAACGAGCGGGGAGGAAGAAGTTCCGGGAGACTCGCCACCCGGTGTACCGGGGTGTCAGGAGGAGGAACTCCGGCAAGTGGGTGTGTGAAGTGCGCGAGCCCAATAAGAAAACAAGAATTTGGCTGGGGACCTTCCCCACTGCGGACATGGCCGCGAGGGCCCACGACGTGGCAGCAATAGCTCTGAGGGGCCGGTCAGCTTGTCTTAACTTTGCAGACTCTGCTTGGCGGTTGCCACTGCCGGCGTCGAATGAGGCCAAGGATATTCAGAAGGCGGCGGCAAAAGCTGCGGAGGCATTCCGTCCAGGGGTGGAATCGGAGAGCGACAAATTGAGGCATGAAAATGCAGAGGCTGCGACCACGACGGCGGCGGCAGTGGCGGAGGAGCAGAGTATATTCTTAATGGATGAAGGAGTGCAGGGGATGCCGGAATTGCTGAGGAACATGGCGGACTCTGTGCTGATGTCGCCTACTCATAGCCTTGGCGATCAGTACGATGGTGCTGACGTGGAAGTGGATGATGCTGAAGTGTCATTATGGAGTTATTCAATTTAA 729 0.5514 MFSFNCSSHPHPLRSQYNCDLEVLEYTSSPASDCGSGSGVPSLFLSDEEVLLAATHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSAWRLPLPASNEAKDIQKAAAKAAEAFRPGVESESDKLRHENAEAATTTAAAVAEEQSIFLMDEGVQGMPELLRNMADSVLMSPTHSLGDQYDGADVEVDDAEVSLWSYSI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci689g0001 242 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Prci689g0001 242 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Prci689g0001 242 CDD AP2 74 132 IPR001471 GO:0003700|GO:0006355
Prci689g0001 242 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Prci689g0001 242 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 45 240 IPR045277 GO:0003700
Prci689g0001 242 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Prci689g0001 242 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Prci689g0001 242 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Prci689g0001 242 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Prci689g0001 242 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci689g0001 52 240 AP2-EREBP Transcription Factor Family AT4G25470 62.121 7.27e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci689g0001 AP2 1e-14 CL0081