Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci686g0004 ATGGGAATGGAAACCAGAAAGCTCTCAGATGAATATGAAGTTTCAGAGATCTTAGGAAGAGGAGGATTTTCTGTTGTCAGAAAAGGAATTAAAAAATCAAGCAGTGAAAAAAACCAGGTAGCCATAAAAACACTCAGAAGAGTAGGTACCTCTGATCCTTCTTCTGGATTTCCAAGAACTCAAAGAGGTCATAATAAGAGTATAGCTGCCATGGGGTTCCCAACATGGAGACAAGTTTCAATATCTGATGCTTTACTCACCAATGAGATCTTAGTCATGAGGAAGATAGTTGAGAACGTTTCACCTCATCCAAATGTGATTGACCTCTATGATGTTTATGAAGACTCAAATGGGGTTCATCTCGTTCTCGAGCTTTGCTCCGGTGGCGAGCTGTTTGACCGGATTGTGGCTCAAGAGAAGTACTCGGAGGCCGAAGCTGCAGCTGTCATTCATCAGATTGCAAAAGGACTAGAGGCTATTCATAGAGCTAATATTGTGCACAGGGACTTGAAGCCTGAGAATTGCTTATTCCAGGACAGTAGAAAGGATTCTCCTCTGAAGATCATGGACTTTGGGTTGAGTTCTGTGGAGGAATTTACTGACCCAGTTGTTGGCTTGTTTGGATCCATTGATTATGTCTCACCAGAGGCTCTATCTCAAGGAAAGATTACTAATAAGAGTGACATGTGGTCCGTGGGAGTAATTCTTTATATCTTACTCTCTGGGTATCCACCTTTCATCGCTCAGTCTAATCGCCAAAAGCAACAAATGATCATGACTGGGAGTTTCAGTTTTTATGAGAAGACTTGGAAGACCATTTCCTCATCAGCAAAGCAATTGATTTCAAGTCTCTTAGCCGTTGATCCTGATAGGAGACCTAGCGCTCATGAGCTTCTCACTCATCCATGGGTCAGAGGAGAAATAGCTAAAGGTGATCAGATGGATCCTGAGATTGTTGACAGATTGCAAAAATTTAATGCTCGTCGCAAACTCCGTGCTGCAGCAATTGCTAGTTTATGGAGCAGCACAGTCTTCTTGAGGATTAAAAATTTGAAATCCTTGTTGGGATCCTATGATCTTACACCAGAGGAAATTGAAAACCTCAAGATACACTTCAAGAAAATATGTGCAGGTGGAGACAATGCCACGCTCCCTGAATTTGAGGAGGTTCTAAAAGCAATGAATATGTCATCACTTATCCCTCTAGCACCACGCATATTTGACATATTTGACAACAACCAAGATGGAACTGTTGACATGAGAGAGATACTCTGTGGGTTTTCCAGCCTTAAGAATTCGAAAGGCGACGATGCACTTCGTCTCTGCTTCCAGATGTATGACACTGATCGATCTGGGTGCATTACTAAGGAAGAAGTAGCATCCATGCTCAGAGCTTTGCCAGATGATTGCCTGCCTGCTGATATCTTTGAACCAGGCAAATTAGATGAGATATTTGACCTGATGGATGCCAACAGTGATGGAAAAGTCACCTTTGAAGAATTCAAAACTGCCATGCAGAGAGACAGCTCTCTGCAGGATTTAGTCCTTTCCTCTCTCCGCCCATCATAG 1569 0.4257 MGMETRKLSDEYEVSEILGRGGFSVVRKGIKKSSSEKNQVAIKTLRRVGTSDPSSGFPRTQRGHNKSIAAMGFPTWRQVSISDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQEKYSEAEAAAVIHQIAKGLEAIHRANIVHRDLKPENCLFQDSRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITNKSDMWSVGVILYILLSGYPPFIAQSNRQKQQMIMTGSFSFYEKTWKTISSSAKQLISSLLAVDPDRRPSAHELLTHPWVRGEIAKGDQMDPEIVDRLQKFNARRKLRAAAIASLWSSTVFLRIKNLKSLLGSYDLTPEEIENLKIHFKKICAGGDNATLPEFEEVLKAMNMSSLIPLAPRIFDIFDNNQDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADIFEPGKLDEIFDLMDANSDGKVTFEEFKTAMQRDSSLQDLVLSSLRPS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci686g0004 522 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Prci686g0004 522 SUPERFAMILY EF-hand 351 512 IPR011992 -
Prci686g0004 522 Gene3D - 347 516 - -
Prci686g0004 522 SMART serkin_6 12 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci686g0004 522 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 131 321 - -
Prci686g0004 522 Gene3D Phosphorylase Kinase; domain 1 2 127 - -
Prci686g0004 522 Pfam Protein kinase domain 12 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci686g0004 522 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 3 127 - -
Prci686g0004 522 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Prci686g0004 522 ProSitePatterns Protein kinases ATP-binding region signature. 18 43 IPR017441 GO:0005524
Prci686g0004 522 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Prci686g0004 522 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Prci686g0004 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 481 - -
Prci686g0004 522 SMART efh_1 438 466 IPR002048 GO:0005509
Prci686g0004 522 SMART efh_1 480 508 IPR002048 GO:0005509
Prci686g0004 522 SMART efh_1 402 430 IPR002048 GO:0005509
Prci686g0004 522 Pfam EF-hand domain pair 437 506 IPR002048 GO:0005509
Prci686g0004 522 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Prci686g0004 522 Gene3D Transferase(Phosphotransferase) domain 1 128 317 - -
Prci686g0004 522 Pfam EF hand 407 422 IPR002048 GO:0005509
Prci686g0004 522 Gene3D - 318 345 - -
Prci686g0004 522 CDD EFh 405 464 IPR002048 GO:0005509
Prci686g0004 522 FunFam calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 347 516 - -
Prci686g0004 522 ProSiteProfiles Protein kinase domain profile. 12 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci686g0004 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Prci686g0004 522 SUPERFAMILY Protein kinase-like (PK-like) 6 318 IPR011009 -
Prci686g0004 522 CDD STKc_CAMK 12 303 - -
Prci686g0004 522 CDD EFh 439 506 IPR002048 GO:0005509
Prci686g0004 522 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci686g0004 4 507 EF-hand Containing Proteins AT5G23580 33.464 5.73e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Prci686g0004 Pkinase 5.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci686g0004 K13412 - gmx:732616 869.766