Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci675g0005 ATGGCTTCCTTTAATCTTCTTCCTTCTCTAGCTCATCTTCCTCTGCTAGCTACTTTATTTGTTACAGTTTTCCCCTTTCAAACGTCCATCAAAGTATCTTTTATGGCCCCTTTTAAATGCTCTGCAAAAATCAACACATGTAATGCCATGCTTTACCACGTAAACCATGGTCTTGACATGGAAGACATAGCCTCTCATTACTCCGTTAATTCATCCCAAATTCAACCCATAACACGGGGCACTAACCAAGATTACCTCATAACTGTTCCTTGTTCTTGTAAAACCGTCACTAACCTTAGGGGATATTTCTTCAACACAACTTACACAGTAGAGGAAGATCAGACCTATATGAATCTGTCAACCTTCTATTACAGTGGACAAGCCTGGTCTCCTACTGATAATGTGACCACGGGTGAAAACTTAACTATACATCTTCCCTGTGGATGCACAGACATTGATTCTCAAATCGTTGTGACATATACAGTCCAGCAGAATGATACAACAGCAGAAATAGCTAATATGCTATCATCTACACTTACTGGCATTCAGAACATGAATGAAGTTTTAGCTAATAGGCCTTCATTCATAGATGTGGGTTGGGTGTTATATGTTCCTAAGGAGCTCAACGGGATTCCATCTCCAAAAGGAAGTGGAAAGAAACTCAAGCATTCTATTATTATTGGCGTCTTAGTGGGTGTGACATTACTTTCTGTTATCACAATGATCATTCTAATTCTGCGGAGAAAAAGAGCCACTGAATCCAGCAAAAAAGACGCACAAGCTGTATCGAAAAGATCAACTTCAAAACCATTATCTAAAAGATCAATTTCCAATAGAAATATTTCCTTAAAGAACTATCAATTTCATATAGAAACTATAGAAGGTATCATGACAATTAATGTTTGTGCAGAAGTAACATCAATTGACTCGGAAAGACCAACAACGTTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAAGTAAAATAATAGGAAAGGGCGGATATGGGACTGTATATTTTGGAATTTTAGGAGAGAAGGAGGTTGCTATAAAAGAAATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAACTCAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGCGACCATCTTCACGATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGGCATGTGCATAGAGATATCAAGACTAGCAATATTCTTCTTGACAATAAACTCAGAGCCAAGATTGCAGATTTCGGACTAGTAAAGCTGTTAGAACGAACAAATGATGATGATTTTATAGCAACAAGGCTTGTTGGGACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAGGTGACCTCAAAAACCGATGTTTTTGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGAAAGCCAAGAAATCCCCAGAATGAGATCACTTATTTCTGTCATTAATGGAGTATTTGAAGCTGATGACCCAGAGAATGTTTTAGAAGATGTCATAGACAAAAACCTTCGAGATAGCTATCCTATGGAGGATGTCTTCAAGATGATAGAAATAGCTCAAAGATGCTTACGCGAAGAACCAATTGAGAGGCCAGAAATGAGGGAGATTGTGGTGATATTGTCACAGATTGTTATGTCCTCCACAGAGTGGGAAGCATCACTAGGTGGTGACAGTGAGGTCTTTAGCGGCATATTCACTGGAAGATGA 1893 0.392 MASFNLLPSLAHLPLLATLFVTVFPFQTSIKVSFMAPFKCSAKINTCNAMLYHVNHGLDMEDIASHYSVNSSQIQPITRGTNQDYLITVPCSCKTVTNLRGYFFNTTYTVEEDQTYMNLSTFYYSGQAWSPTDNVTTGENLTIHLPCGCTDIDSQIVVTYTVQQNDTTAEIANMLSSTLTGIQNMNEVLANRPSFIDVGWVLYVPKELNGIPSPKGSGKKLKHSIIIGVLVGVTLLSVITMIILILRRKRATESSKKDAQAVSKRSTSKPLSKRSISNRNISLKNYQFHIETIEGIMTINVCAEVTSIDSERPTTFYLEEIEEAINKESKIIGKGGYGTVYFGILGEKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLLERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGKPALFRESQEIPRMRSLISVINGVFEADDPENVLEDVIDKNLRDSYPMEDVFKMIEIAQRCLREEPIERPEMREIVVILSQIVMSSTEWEASLGGDSEVFSGIFTGR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci675g0005 630 SUPERFAMILY LysM domain 158 205 IPR036779 -
Prci675g0005 630 ProSitePatterns Protein kinases ATP-binding region signature. 332 353 IPR017441 GO:0005524
Prci675g0005 630 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 624 IPR044812 GO:0019199|GO:0045087
Prci675g0005 630 Gene3D Phosphorylase Kinase; domain 1 300 397 - -
Prci675g0005 630 Gene3D LysM domain 152 209 IPR036779 -
Prci675g0005 630 FunFam PTI1-like tyrosine-protein kinase 3 398 616 - -
Prci675g0005 630 SMART serkin_6 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci675g0005 630 Gene3D Transferase(Phosphotransferase) domain 1 398 618 - -
Prci675g0005 630 ProSiteProfiles LysM domain profile. 158 204 IPR018392 -
Prci675g0005 630 Pfam Protein kinase domain 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci675g0005 630 SUPERFAMILY Protein kinase-like (PK-like) 314 602 IPR011009 -
Prci675g0005 630 Pfam LysM domain 160 205 IPR018392 -
Prci675g0005 630 ProSiteProfiles Protein kinase domain profile. 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci675g0005 311 630 Receptor kinase-like Gene Family AT1G51940 51.064 2.17e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci675g0005 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci675g0005 - - gmx:100800907 806.594