Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci66g0010 | ATGGAAATTCACTTCCAGCAACCAAAGCAGCATGAGAAAGCAGCAGTTGTTCCAATCAGCAGAGGAGGCAAATTCAAAGGAAGGAACAAGAACAATGGCACAAACAAATTTGTAGGGGTGAGACAAAGACCTTCTGGAAGATGGGTGGCTGAGATCAAAGACACAACCCAGAAGATAAGAATGTGGCTTGGCACATTTGAGACTGCAGAAGAAGCAGCCAGGGCTTATGATGAAGCTGCCTGCCTTCTTCGAGGATCCAACACTCGCACCAACTTCATCACCCGTGTCTCCACAGATTCACCTCTCGCTTCTCGTATTCGAAATCTGCTTAAGAACAGAAAAGGAACCAAGGAACAAGATGTGGATGCTTCTTCCTCAAGAGTCAGCGCCATTAGCTCTACTAGTACAAGTACTACTGGGAGCTCAGACTTGAGCAATGGTGACAAAAGTGAGAGCACTCTTTCTAGTGGGAAAATTCAGAACACAGAGTTATTTGGTGATGGTTATAGACCAGATTTGAGCAGTTGCAGGGAAGGTCTTGATCTAGGTTCCCAATCTAATCCTTCATGGGCACTTGGACCTTTCGTTGATCTTTTTCCTTTTGCTCAAGTATTGGACGTGCCAAAGCCTGATGGTATCGCTGATACAGCTGGTACAGTTGAGTTAGAGCTTTCAGAATTTGAGAGGATGAAATTTGAAAGGCAAATATCAGCCTCTCTCTATGCAATTAATGGAGTGCATGAGTACATGGAGACTGTCCAGGACTCTAATGAAGAAGCTCTCTGGGATCTCCCACCCTTATGGTCAATGTTCTGCTAA | 819 | 0.4481 | MEIHFQQPKQHEKAAVVPISRGGKFKGRNKNNGTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITRVSTDSPLASRIRNLLKNRKGTKEQDVDASSSRVSAISSTSTSTTGSSDLSNGDKSESTLSSGKIQNTELFGDGYRPDLSSCREGLDLGSQSNPSWALGPFVDLFPFAQVLDVPKPDGIADTAGTVELELSEFERMKFERQISASLYAINGVHEYMETVQDSNEEALWDLPPLWSMFC | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci66g0010 | 272 | ProSiteProfiles | AP2/ERF domain profile. | 36 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | MobiDBLite | consensus disorder prediction | 122 | 157 | - | - | |
Prci66g0010 | 272 | MobiDBLite | consensus disorder prediction | 109 | 157 | - | - | |
Prci66g0010 | 272 | SUPERFAMILY | DNA-binding domain | 36 | 93 | IPR016177 | GO:0003677 | |
Prci66g0010 | 272 | Gene3D | AP2/ERF domain | 35 | 95 | IPR036955 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | FunFam | ethylene-responsive transcription factor RAP2-11 | 35 | 94 | - | - | |
Prci66g0010 | 272 | Pfam | AP2 domain | 36 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 28 | 236 | - | - | |
Prci66g0010 | 272 | CDD | AP2 | 36 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | PRINTS | Ethylene responsive element binding protein signature | 37 | 48 | IPR001471 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | PRINTS | Ethylene responsive element binding protein signature | 59 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Prci66g0010 | 272 | SMART | rav1_2 | 36 | 99 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci66g0010 | 24 | 272 | AP2-EREBP Transcription Factor Family | AT5G19790 | 42.802 | 1.76e-50 | 164 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Prci66g0010 | AP2 | 6e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci66g0010 | K09286 | - | gmx:100796898 | 322.783 |