Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci66g0008 ATGAACGACCTTCTATCGGAATCGTTTGAAATCCCTCGTGGGCATGGAAATAGAGACGTCGAGTTAGGGGCATATCTACGGACTTCAGGAGAACTGGGTTTGGATACTTTCTTCAAAAAGGTTCAAGAGCTTGATAAGCAATTTGAGAGGCTGGGTAAGCTTCTCAGGCAGCTCCAGGATGCTCACGAGGAGTCCAAGGCAGTGACCAAAGCTCCTTCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGATGAAGTTAAGAAAATTGCCCATCACATAAAAACAAGAATTGAAGAATTGGACAGAGAAAACTTGGAAAATAGGCAAAAGCGTGGATGTGGAAAAGGAACAGGCATCGACAGGTCAAGGATAGCAACCACCATTGCCTTAAAAAAGAAATTGAAGGACAAGATGGATGAATTTCAGCGGCTGAGGGAAATCATACATCAAGAATATCGTGAGGTTGTAGAGAGACGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAAACCGGAGATAGTGAACAGATTTTCCAGAATGCAATCAGGGAACACGGAAGAGGCCAGATACTGGACACACTGGCAGAAATTCAGGAACGGCACGAAGCAGCTAGAGACGTTGAGAGGAAGCTTCTTGAATTGCAGCAAGTATATCTGGATTTGGCGGTGTTGGTTGATTCACAGGGTGACATTCTTAACAACATAGAATCCCAGCTTCCGCTAATGTTGGATCTAGGTATCAACTGCAGTAGATCACGTACAGCAAGGCAATAA 804 0.4378 MNDLLSESFEIPRGHGNRDVELGAYLRTSGELGLDTFFKKVQELDKQFERLGKLLRQLQDAHEESKAVTKAPSMKDIKQRMEKDVDEVKKIAHHIKTRIEELDRENLENRQKRGCGKGTGIDRSRIATTIALKKKLKDKMDEFQRLREIIHQEYREVVERRVYTVTGTRADEETIDRLIETGDSEQIFQNAIREHGRGQILDTLAEIQERHEAARDVERKLLELQQVYLDLAVLVDSQGDILNNIESQLPLMLDLGINCSRSRTARQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci66g0008 267 Coils Coil 85 105 - -
Prci66g0008 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 249 IPR000727 -
Prci66g0008 267 PANTHER SYNTAXIN 37 248 IPR045242 -
Prci66g0008 267 Coils Coil 133 153 - -
Prci66g0008 267 SUPERFAMILY t-snare proteins 33 248 IPR010989 GO:0016020|GO:0016192
Prci66g0008 267 CDD SNARE_syntaxin1-like 203 248 - -
Prci66g0008 267 Coils Coil 41 64 - -
Prci66g0008 267 Pfam Syntaxin 37 239 IPR006011 GO:0016020
Prci66g0008 267 Gene3D - 32 235 - -
Prci66g0008 267 SMART SynN_4 29 155 IPR006011 GO:0016020
Prci66g0008 267 FunFam Syntaxin 132 29 158 - -
Prci66g0008 267 SMART tSNARE_6 199 265 IPR000727 -
Prci66g0008 267 CDD SynN 34 191 IPR006011 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci66g0008 1 254 SNARE and Associated Proteins AT3G03800 70.196 8.78e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci66g0008 K08486 - gmx:100306329 401.364