Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci665g0012 ATGGCAGCATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTTGTTCCCTCTTTTTTCGGTGTCCCTTCTAGCTATGTGAGGTCTGTTAATGTCCGTTGTTTCTATAAGTGTCAAAGAGTTTGGCTTCGGTCAAGCCGTCGTTTTGTTCCTCTACTTGCTTCGTCGTGCAGCAATTTTGAGTCTGTGGAACTGCAAGAAGCCCAGAATGCTGTTTCAAAACTTCTTCGAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATTGCATCTAATTCACCGAAGTATGTGAGGATGCTGGTTGATGAAGTACGGGATTTGGACGAACTTTCAATGTGGGAGACGCAAATTGGCGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGAAGAAAGGTGATAATGGCAAAGTTGTATACTTGGAGAGTCTGGGTTTGAGCCTCTCTTCAGCTATGAACGTGGCCAGATATCTGTCAGGAGAAACACTTGTAGCACTCATCCATAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCGGTCAGAAGAGTTCGCAATATGATGATGCAGTTATCTATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGACCATGTTGAATTCCAGTGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCAGTAAAATCTCACATGAAACCGTTAGTGGAATTTCTTGAGAGTGTTGGAATCCAAAGAGATCTCATGAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAAGTCGAATACTAGCCTTGAATGAGATTGGTGGTGTAAATAACAATCATGTTAAGTTGCTGATAAAATATCCATGGATATTATCAAAAAGCATTCAAGACAACTATAAGGAAATCCTCTCTTTGTTTGATTCGGAGAAGGTTCCCAAGGCATTTGTTGATCATGCAATCAAAAGCTGGCCCCATATCCTGGGCTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAGATAGGAGTTCAACAGAAGAAGTTAGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTGCAGAAGCCACAAGACTTTCTCCAGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGAAAATACTGGTTCGCTGCCCTGAAATCTTTGCTGCTTGCCCTGCCAAGACTCTCAAGAGAAAGATTGAGTTCCTCCATAGTATTGGTGTTTCTGAAGTTCACCTTCCTCGGGTCATAAAAAAGTATCCAGAACTTCTTGTGTCCGATCCAGACAGAACCATGCTACCTAGGTTGGTGTACTTGATGAAGTTAGGACTATCTGAAAGAGACATTGCATTGATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGCAGAATTTCTGGTGAACACAATGGAGAGGCCAGTGAAGGACGTGGTGGGATACCCCAGGTATTTTAGCTATTCTTTAGAGAAGAAGATAAAGCCAAGATTTTGGGTGCTTAAGGGAAGAAACATTGAGTGTAGTTTGAAGGATATGCTAGCAAAAAATGACGAAGAATTTGCTGCTGAATATATGAATCTCCCATCTCCTCATTCTTGA 1740 0.4138 MAACCPSCSKFTPSSFLPHSSLVPSFFGVPSSYVRSVNVRCFYKCQRVWLRSSRRFVPLLASSCSNFESVELQEAQNAVSKLLREFGVSEEESNSIASNSPKYVRMLVDEVRDLDELSMWETQIGGFQEKVVHIARKKGDNGKVVYLESLGLSLSSAMNVARYLSGETLVALIHKVKCMKELFFSGSESYEFPVRRVRNMMMQLSIPIDEDLQQTLSFFEKVEARRGGLTMLNSSDAAFDFLIESFPRLLLLSVKSHMKPLVEFLESVGIQRDLMRNILLTFPPSLLWNIEVFKSRILALNEIGGVNNNHVKLLIKYPWILSKSIQDNYKEILSLFDSEKVPKAFVDHAIKSWPHILGCSSSKLKLMVDQFGEIGVQQKKLGQVIAKSPQLLLQKPQDFLQVVLFFENMGFDRQTIGKILVRCPEIFAACPAKTLKRKIEFLHSIGVSEVHLPRVIKKYPELLVSDPDRTMLPRLVYLMKLGLSERDIALMVRSFSPLLGYSIEEVLRPKAEFLVNTMERPVKDVVGYPRYFSYSLEKKIKPRFWVLKGRNIECSLKDMLAKNDEEFAAEYMNLPSPHS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci665g0012 579 Coils Coil 72 92 - -
Prci665g0012 579 PANTHER CGI-12 PROTEIN-RELATED 146 365 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 Pfam mTERF 78 297 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Prci665g0012 579 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
Prci665g0012 579 Gene3D Transcription termination factor 3, mitochondrial 362 576 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci665g0012 mTERF 2.9e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci665g0012 K15031 - qsa:O6P43_022473 706.057