Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci665g0011 ATGGCAGCATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTTGTTCCCTCTTTTTTCGGTGTCCCTTCTAGCTATGTGAGGTCTGTTAATGTCCGTTGTTTCTATAAGTGTCAAAGAGTTTGGCTTCGGTCAAGCCGTCGTTTTGTTCCTCTACTTGCTTCGTCGTGCAGCAATTTTGAGTCTGTGGAACTGCAAGAAGCCCAGAATGCTGTTTCAAAACTTCTTCGAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATTGCATCTAATTCACCGAAGTATGTGAGGATGCTGGTTGATGAAGTACGGGATTTGGACGAACTTTCAATGTGGGAGACGCAAATTGGCGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGAAGAAAGGTGATAATGGCAAAGTTGTATACTTGGAGAGTCTGGGTTTGAGCCTCTCTTCAGCTATGAACGTGGCCAGATATCTGTCAGGAGAAACACTTGTAGCACTCATCCATAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCGGTCAGAAGAGTTCGCAATATGATGATGCAGTTATCTATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGACCATGTTGAATTCCAGTGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCAGTAAAATCTCACATGAAACCGTTAGTGGAATTTCTTGAGAGTGTTGGAATCCAAAGAGATCTCATGAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAAGTCGAATACTAGCCTTGAATGAGATTGGTGGTGTAAATAACAATCATGTTAAGTTGCTGATAAAATATCCATGGATATTATCAAAAAGCATTCAAGACAACTATAAGGAAATCCTCTCTTTGTTTGATTCGGAGAAGGTTCCCAAGGCATTTGTTGATCATGCAATCAAAAGCTGGCCCCATATCCTGGGCTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAGATAGGAGTTCAACAGAAGAAGTTAGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTGCAGAAGCCACAAGACTTTCTCCAGGTTCAGCTTCCTTCTAGTTCAACTATAGTATGGAAATCCAGGTCAAACCGCCTAGTTGAACTGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGAAAATACTGGTTCGCTGCCCTGAAATCTTTGCTGCTTGCCCTGCCAAGACTCTCAAGAGAAAGATTGAGTTCCTCCATAGTATTGGTGTTTCTGAAGTTCACCTTCCTCGGGTCATAAAAAAGTATCCAGAACTTCTTGTGTCCGATCCAGACAGAACCATGCTACCTAGGTTGGTGTACTTGATGAAGTTAGGACTATCTGAAAGAGACATTGCATTGATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGCAGAATTTCTGGTGAACACAATGGAGAGGCCAGTGAAGGACGTGGTGGGATACCCCAGGTATTTTAGCTATTCTTTAGAGAAGAAGATAAAGCCAAGATTTTGGGTGCTTAAGGGAAGAAACATTGAGTGTAGTTTGAAGGATATGCTAGCAAAAAATGACGAAGAATTTGCTGCTGAATATATGAATCTCCCATCTCCTCATTCTTGA 1803 0.4143 MAACCPSCSKFTPSSFLPHSSLVPSFFGVPSSYVRSVNVRCFYKCQRVWLRSSRRFVPLLASSCSNFESVELQEAQNAVSKLLREFGVSEEESNSIASNSPKYVRMLVDEVRDLDELSMWETQIGGFQEKVVHIARKKGDNGKVVYLESLGLSLSSAMNVARYLSGETLVALIHKVKCMKELFFSGSESYEFPVRRVRNMMMQLSIPIDEDLQQTLSFFEKVEARRGGLTMLNSSDAAFDFLIESFPRLLLLSVKSHMKPLVEFLESVGIQRDLMRNILLTFPPSLLWNIEVFKSRILALNEIGGVNNNHVKLLIKYPWILSKSIQDNYKEILSLFDSEKVPKAFVDHAIKSWPHILGCSSSKLKLMVDQFGEIGVQQKKLGQVIAKSPQLLLQKPQDFLQVQLPSSSTIVWKSRSNRLVELVVLFFENMGFDRQTIGKILVRCPEIFAACPAKTLKRKIEFLHSIGVSEVHLPRVIKKYPELLVSDPDRTMLPRLVYLMKLGLSERDIALMVRSFSPLLGYSIEEVLRPKAEFLVNTMERPVKDVVGYPRYFSYSLEKKIKPRFWVLKGRNIECSLKDMLAKNDEEFAAEYMNLPSPHS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci665g0011 600 Coils Coil 72 92 - -
Prci665g0011 600 Pfam mTERF 262 589 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 Pfam mTERF 77 297 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 Gene3D Transcription termination factor 3, mitochondrial 413 597 IPR038538 -
Prci665g0011 600 Gene3D Transcription termination factor 3, mitochondrial 227 408 IPR038538 -
Prci665g0011 600 SMART mt_12 474 505 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 510 542 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 438 469 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 543 574 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 SMART mt_12 382 433 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 PANTHER CGI-12 PROTEIN-RELATED 146 396 IPR003690 GO:0003690|GO:0006355
Prci665g0011 600 FunFam Mitochondrial transcription termination factor family protein 362 596 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci665g0011 mTERF 7.7e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci665g0011 K15031 - qsa:O6P43_022473 693.73