Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci663g0003 ATGGCGGCGTCGTGTTTTCATCCACTTCGGCTACCAAAGTGGAAGGGGAAATCGTTATTACCCGCGGCTTCTTCTTCTTCTTTGTCGTCGTCCAAGAGGCAGTTGAATTGTGATGCGGAGAATTTGGAAAGGAAGAATTTCGAAAGCTTGGAATCATGGTCGATGATATTGGAGTCTGAGAATTTTGAGACGTGGGAGGCTTTGAAGGAGGATCAGGAAGAATGGACTGCCGATCTTTCTCAGCTTTTTATCGGAAACAAGTTTGCTTCCGGCGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGAGAGCTGTGGCTGTGAAAATGGTTAGAATTCCAGCTCAGGACGAGGAAAAAAGATCTTTACCGGAGCAGCAATTTAAATCTGAAGTTGCTTTACTTTCACGTCTTTTTCATCCTAATATTGTTCAGTTTATTGCAGCTTGTAGAAAACCACCGGTGTACTGTATCATAACAGAATACATGTCACAAGGAAATCTGAGGATGTACCTGAACAAAAAAGAGCCATACTCTCTTTCAACCGAAACTATACTAAGGCTAGCACTTGACATATCTAAGGGTATGGAGTACCTTCATTCACAAGGTGTAATGCACAGAGACCTCAAGTCAACTAACTTGCTTCTCGATGATGAAATGAGGGTTAAGGTAGCAGATTTTGGCACATCATGTCTTGAAACGCGGTGCCGGGAAACCAAAGGAAACATGGGGACGTATCGTTGGATGGCCCCAGAGATGATCAAGGAAAAACCTTATACTCGTAAAGTAGATGTGTATGGTTTTGGAATTGTGCTTTGGGAGCTCACAACCGCGTTACTTCCTTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTGTCAGACAAGATCTCTATCTCAATTGCAGGACCTAGCATCAGAAACAGGGCTTTTTCCTGCAAGCCATTAGCTAGTCTTTTTAATAGAAGGAGACGAACCAAAGGCCACCGCTGCCAGAAAATTGTCAGCCAGCGCTCGCACATCTGA 1029 0.4431 MAASCFHPLRLPKWKGKSLLPAASSSSLSSSKRQLNCDAENLERKNFESLESWSMILESENFETWEALKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPAQDEEKRSLPEQQFKSEVALLSRLFHPNIVQFIAACRKPPVYCIITEYMSQGNLRMYLNKKEPYSLSTETILRLALDISKGMEYLHSQGVMHRDLKSTNLLLDDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYGFGIVLWELTTALLPFQGMTPVQAAFAVSDKISISIAGPSIRNRAFSCKPLASLFNRRRRTKGHRCQKIVSQRSHI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci663g0003 342 FunFam Serine/threonine-protein kinase isoform 1 72 164 - -
Prci663g0003 342 Pfam Protein tyrosine and serine/threonine kinase 84 296 IPR001245 GO:0004672|GO:0006468
Prci663g0003 342 CDD STKc_MAP3K-like 89 297 - -
Prci663g0003 342 Coils Coil 25 45 - -
Prci663g0003 342 SUPERFAMILY Protein kinase-like (PK-like) 56 298 IPR011009 -
Prci663g0003 342 ProSiteProfiles Protein kinase domain profile. 82 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci663g0003 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Prci663g0003 342 Gene3D Transferase(Phosphotransferase) domain 1 165 319 - -
Prci663g0003 342 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 67 297 - -
Prci663g0003 342 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Prci663g0003 342 PRINTS Tyrosine kinase catalytic domain signature 263 285 IPR001245 GO:0004672|GO:0006468
Prci663g0003 342 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Prci663g0003 342 PRINTS Tyrosine kinase catalytic domain signature 244 254 IPR001245 GO:0004672|GO:0006468
Prci663g0003 342 Gene3D Phosphorylase Kinase; domain 1 71 164 - -
Prci663g0003 342 SMART serkin_6 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci663g0003 1 297 MAP Kinase Kinase Kinase AT1G62400 80.795 5.73e-180 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci663g0003 PK_Tyr_Ser-Thr 4.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci663g0003 - - gmx:100803225 506.523