LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci65g0004	ATGGAGGACAGACTAGTAAACACAGTCTCTGTAATATCAGTGATTGCTCTGATCACATTCGTCGTCATCGCTCGCTGCTTCTTAAAGCGTTCAAGAGTCTTCTTTCTCATCTTGGGGGCCGATGTTTCGTTAATCATCGCAGTCTTCGCCTGCGTTCTAATCCGATTGCGATACAACCGCAGAAGAAGACTGATAGAATCCCGATATAAATCTGAAGGTAGAGAGCTCCGAATAGAGTACAGCTTCCTGCGAAAAGTCGCCGGCGTTCCGACCAAGTTCCGATTCCAAGAGCTCGAAGACGCCACCAACAGATTCCAGTCGCTACTCGGCCAAGGAGCCTCGGCTTCAGTCTTCAAAGGCATTTTAAACGACGGCACCACGGTCGCCGTCAAGCGAATCAACGGCGAAGAACGAGGCGAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGCGTCCAGCACGTCAACCTCGTGCGCCTGATTGGGTACTGTAATTCCACCACAGCCCCTAGGTACTTGGTTTACGAGTTCATCCCAAACGGATCTCTGGATTCCTGGATATTCCCCTTTAAAACCGAGAATCGAAGATCTCGCCGGGGGTTTTTATCGTGGAGCTTGAGATACAGAGTAGCCATCGATGTAGCCAAAGCTCTCTCTTACCTCCACGATGATTGCAGATCGACAATCCTACACCTGGATGTAAAACCAGAGAACATTCTGCTGGACGAGAATTTCAAAGCAGTGGTCTCAGACTTCGGCCTGTCGAAGCTAATGGGGAAAGATGAGAGCGAAGTGATGACAACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTGTTAGAACACGGAGTTTCAGAGAAAACAGACATATACAGTTACGGCATGGTACTGCTGGAGATAATAGGGGGAAGAAGAAACGTGTGCGTAATCCAAGATCCAAGGGACAGGGCAAAGAAGAAGTGGGATTACTTTCCAAAGACTGTGAACGAGAAAGTGAGAGAAGGAAAACCCATGGAGATAGTGGATCAGAGGTTGATTGACAGTGGGGGCGTGGAAGAGAGAGAAGTGAAGAGGATGGTGTACGTGGCACTGTGGTGCATACAAGAGAGGCCGAGGGTGAGACCAAGCATGAAGCAAGTGGTGGAGATGCTTGAAGCGAGAGCGAAGGTGGAGGAGCCACCTGATACGAGGATGGTTACGGCCAATTTCCTTTCAGTAGGAGAAGAAGAAGGAGAAGCAGAAAGCTGCTCGAATGGCACCACATTGGCTGATTATGTGGCGAGCCAGAGGGCAATAGGAAATTCGGGTTACTATGGATCCACCTACTCCATGGCCACCACAGTTCTATCTGGCAGATAG	1368	0.4956	MEDRLVNTVSVISVIALITFVVIARCFLKRSRVFFLILGADVSLIIAVFACVLIRLRYNRRRRLIESRYKSEGRELRIEYSFLRKVAGVPTKFRFQELEDATNRFQSLLGQGASASVFKGILNDGTTVAVKRINGEERGEKEFKSEVAAIASVQHVNLVRLIGYCNSTTAPRYLVYEFIPNGSLDSWIFPFKTENRRSRRGFLSWSLRYRVAIDVAKALSYLHDDCRSTILHLDVKPENILLDENFKAVVSDFGLSKLMGKDESEVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIIGGRRNVCVIQDPRDRAKKKWDYFPKTVNEKVREGKPMEIVDQRLIDSGGVEEREVKRMVYVALWCIQERPRVRPSMKQVVEMLEARAKVEEPPDTRMVTANFLSVGEEEGEAESCSNGTTLADYVASQRAIGNSGYYGSTYSMATTVLSGR	455

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci65g0004	455	Gene3D	Transferase(Phosphotransferase) domain 1	179	405	-	-
	Prci65g0004	455	SMART	serkin_6	103	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci65g0004	455	FunFam	Putative receptor-like protein kinase	70	178	-	-
	Prci65g0004	455	PANTHER	OS07G0415500 PROTEIN	44	399	-	-
	Prci65g0004	455	Gene3D	Phosphorylase Kinase; domain 1	68	178	-	-
	Prci65g0004	455	Pfam	Protein kinase domain	107	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci65g0004	455	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	230	242	IPR008271	GO:0004672\|GO:0006468
	Prci65g0004	455	ProSiteProfiles	Protein kinase domain profile.	103	393	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci65g0004	455	FunFam	Putative receptor-like protein kinase	179	395	-	-
	Prci65g0004	455	ProSitePatterns	Protein kinases ATP-binding region signature.	109	131	IPR017441	GO:0005524
	Prci65g0004	455	SUPERFAMILY	Protein kinase-like (PK-like)	86	388	IPR011009	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci65g0004	1	399	Receptor kinase-like Gene Family	AT5G20050	64.090	6.12e-179	506

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Prci65g0004		Pkinase	2.5e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci65g0004	-		-	gmx:100779485	615.535