Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci652g0001 ATGGTCAAATGGAGGAACCATAGAAGAATACCCACCACGCTTGATCAGGGGACCGTGATAGCTTGCCTTTTGGATTCGTATTCAATATCCTATTTGAGGGCAATCATATACTGTAGATCATCTGATAGATTTCCGGGATTCCTTGTCAGAGGGGAAAGAGTTGAACTTTATCTGAAAGTTAAGGAATCATTCAGAATGAGCCAGTCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAAGGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCTAGGAACTCTGAGACTGGGGAGGCTGTGGCTATTAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAATAGCAACAATGAAGTTAATCAAGCATCCAAATGTTGTTCTATTGTATGAGGTAATGGGAAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTTACTGGAGGGGAGCTCTTTGACAAAATTGTAAACAATGGGCGAATGAACGAAAAAGAAGCACGTAGTTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCATAGAGACCTCAAGCCAGAGAATTTGCTGCTAGATGCTTCTGGCCAGCTTAAAGTTTCTGATTTTGGTTTGAGTGCACTATCACAAGAAGTCAAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAACTATGTTGCTCCTGAGGTCCTTGATGATAGAGGCTATGATGGAGCAACTGCGGACTTGTGGTCTTGTGGAGTGATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTTGATGACCCTAATCTTATGAACCTATATAAAAAAATATCTGCTGCCGAATTTACTTGTCCCCCATGGATGTCCTTCAGTGCCAGGAAATTGATAATTCGAATTTTGGATCCTAACCCCATGACACGTATCACTATATCTGAGATCTTGGATGATGAATGGTTTAAGAAAGATTACAAGCCTGCAGTTTTTGAGGAGACAGGGAAGACCAACCTTGATGACATTGAAGCTGTGTTTAGAGATTCTGAAGAGCACCATGTGATGGAGAAGAAGGAAGAACAGCCAACAGCCATTAATGCATTTGAATTAATTTCTATGTCCAAAGGGCTAAACCTTGAGAACTTGTTTGATATAGAGCAGGCTTTGAAAAGAGAAACAAGGTTCACATCAAGACGCCCGGCGAAAGAGATAGTTAACAAGATTGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTCCAGAAGAAAAACTACAAGATGAGGCTCGAGAATGTGAAAGCAGGAAGGAAGGGGAACCTTAATATTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGTTCTACAAAAATCTTTCAACAAGGCTTGACGATGTTGTTTGGAAAGCTGAGGACACTCAAGAAGCAAAGTAA 1512 0.4094 MVKWRNHRRIPTTLDQGTVIACLLDSYSISYLRAIIYCRSSDRFPGFLVRGERVELYLKVKESFRMSQSKIKRRIGKYEVGRTIGEGTFAKVKFARNSETGEAVAIKILEKEKVLKHKMAEQIRREIATMKLIKHPNVVLLYEVMGSRTKIYIVLEFVTGGELFDKIVNNGRMNEKEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGQLKVSDFGLSALSQEVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWMSFSARKLIIRILDPNPMTRITISEILDDEWFKKDYKPAVFEETGKTNLDDIEAVFRDSEEHHVMEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRRPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEDTQEAK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci652g0001 503 ProSiteProfiles NAF domain profile. 371 395 IPR018451 GO:0007165
Prci652g0001 503 SUPERFAMILY Protein kinase-like (PK-like) 74 350 IPR011009 -
Prci652g0001 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Prci652g0001 503 CDD STKc_SnRK3 77 332 - -
Prci652g0001 503 Gene3D Kinase associated domain 1, KA1 370 495 - -
Prci652g0001 503 ProSiteProfiles Protein kinase domain profile. 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci652g0001 503 FunFam Non-specific serine/threonine protein kinase 69 157 - -
Prci652g0001 503 CDD CIPK_C 377 491 - -
Prci652g0001 503 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 72 484 - -
Prci652g0001 503 Gene3D Phosphorylase Kinase; domain 1 67 157 - -
Prci652g0001 503 FunFam Non-specific serine/threonine protein kinase 71 374 - -
Prci652g0001 503 Pfam Protein kinase domain 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci652g0001 503 SMART serkin_6 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci652g0001 503 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Prci652g0001 503 Pfam NAF domain 373 432 IPR004041 GO:0007165
Prci652g0001 503 Gene3D Transferase(Phosphotransferase) domain 1 158 360 - -
Prci652g0001 503 FunFam Non-specific serine/threonine protein kinase 370 495 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci652g0001 68 476 CBL-interacting serine-threonine protein kinases AT2G26980 78.240 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci652g0001 Pkinase 8e-73 CL0016