LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci643g0001	ATGCCAACTTTGATCGTCTTCCTCCTTGTTCTTCTTAACTTGCTTATCTCTTGCTCAGGTTATTTATCTTTAAAAGTACTCATGTCTCCTTCTCCAAAACCATACCACCCACTGTCTGTCAGGGAAATGTTATTTAAGCAGGTGAAGTCAGTTTCTACTACTGTATCATCTGCCTCACCTAAACCTGCTAAAACTTGGCTGGTTCCTTCTTTGGCACCTGCACCGTCTCCATCTGGTCAAGGTCCTCTCGTGAATCATAGGCCAAGACATCATCACCATCTTCATCATCACCGTGGGATGAGACCTCATGTAGTAGCTCCATCCCCTTCTAAAGATCAAGGTTGTGACCAAATATGTATGGATCCGCTTACAGCAACCCCCTTTGGTTCACCTTGTGGCTGTGTCTTTCCCATGAAAGTCAAACTTATTTTGGATGTTGCACCTTTTGCAATTTTTCCTGTAATGAATGAATTAGAGATTGAGGTTGCATCAGGCACATATTTGGCACAGAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATGTGAACTTGGTTCCACTAGGAGAGAAGTTTGACAACACCACTGCAGTTCTGATATATGATCGGTTTTGGCATAAGAAAGTTCCTCTAGATATGAACCTTTTTGGTGACTATGCAGTCCTGTCCATTAGTTATCCAGGGATTCCATCATCGCCACCATATGGAAGCTATGTTGGGAGTGGTCCTAGTGGAAGTGCCGGTAATCTTCCAATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTGAGAACCACAGTCATCATTGCTTTATCTGCCTTTGTACTCATGTTGGTTTTGATCGGAGCATTTTCCATTGTGTTGAAATGGAGGAGGATTACCAGACCATCCAGTGCTGTTGGTCCTGCATTTACTTCATCTATAAACAAACGATCTGGCATGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTCATGTCAACCATGGCTACTTCTGTTCTCTCTGTGAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGGGGATTTGGGCGAGTTTATAGTGGGACATTGGAAGATGGAACTGAAGTTGCAGTCAAGCTGCTAACAAAGGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCACCACCGTAATCTTGTGAAACTCATTGGTATCTGTATTGAAGGGCGTAGAAGGTGCTTGGTGTATGAGCTAGTTCGCAATGGCAGTGTTGAGTCCCATTTGCATGGCTTTGACAAGAAGGAGCCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCGGCAAGAGGCTTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGACTTCAAAGCTAGTAATGTGTTATTAGAAGATGATTTCACCCCTAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCCACTGAAGGAAGTCATCATATTTCTACGCGAGTCATGGGAACTTTTGGGTATGTTGCCCCCGAATATGCAATGACAGGCCATTTACTTGTTAAGAGTGGTTACAGCTATGGAGTAGTGCTGCTTGAACTTCTTACTGGCAGAAAACCAGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGCAGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTAGCTGGAAATTATGACTTTGATGACATGGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCCGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAAGCTCTGAAATTGATATACAATGACACAGACGAGACTTGTGGGGATTGCTGTAGTCAGAAGGAATCTTCTGCTCAGGAGTCTGACATTAGAGCTGATCTTGCTCCTTCAGATAGCAGTTGGTGGAATGCCGGAGGGATGACCCCAAGGCTTACTTATGGTCAAGCATCGTCTTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAATAGACCGTTTTCAACTTCAAGCTTATTGGGTGACGAGATGTCTTCACCAATTAGGCATGGGAACAGATCAGGGCCCTTAAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCTCAGCGTGGTTTAAACGATGGTTACTGGATTTAA	2307	0.4426	MPTLIVFLLVLLNLLISCSGYLSLKVLMSPSPKPYHPLSVREMLFKQVKSVSTTVSSASPKPAKTWLVPSLAPAPSPSGQGPLVNHRPRHHHHLHHHRGMRPHVVAPSPSKDQGCDQICMDPLTATPFGSPCGCVFPMKVKLILDVAPFAIFPVMNELEIEVASGTYLAQSQVKIMGASADSQNQGRTVVDVNLVPLGEKFDNTTAVLIYDRFWHKKVPLDMNLFGDYAVLSISYPGIPSSPPYGSYVGSGPSGSAGNLPITANFVSKNQKMNLRTTVIIALSAFVLMLVLIGAFSIVLKWRRITRPSSAVGPAFTSSINKRSGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGFDKKEPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDXYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGNYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKESSAQESDIRADLAPSDSSWWNAGGMTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEMSSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSQRGLNDGYWI	769

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci643g0001	769	SUPERFAMILY	Protein kinase-like (PK-like)	351	639	IPR011009	-
	Prci643g0001	769	ProSitePatterns	Protein kinases ATP-binding region signature.	373	395	IPR017441	GO:0005524
	Prci643g0001	769	CDD	STKc_IRAK	373	641	-	-
	Prci643g0001	769	FunFam	Receptor-like serine/threonine-protein kinase ALE2	443	660	-	-
	Prci643g0001	769	Pfam	Protein tyrosine and serine/threonine kinase	369	638	IPR001245	GO:0004672\|GO:0006468
	Prci643g0001	769	ProSiteProfiles	Protein kinase domain profile.	367	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci643g0001	769	PANTHER	OS01G0750732 PROTEIN	108	663	-	-
	Prci643g0001	769	MobiDBLite	consensus disorder prediction	69	96	-	-
	Prci643g0001	769	Gene3D	Phosphorylase Kinase; domain 1	338	442	-	-
	Prci643g0001	769	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	488	500	IPR008271	GO:0004672\|GO:0006468
	Prci643g0001	769	MobiDBLite	consensus disorder prediction	705	733	-	-
	Prci643g0001	769	Gene3D	Transferase(Phosphotransferase) domain 1	443	664	-	-
	Prci643g0001	769	MobiDBLite	consensus disorder prediction	707	721	-	-
	Prci643g0001	769	FunFam	receptor-like serine/threonine-protein kinase ALE2	340	442	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci643g0001	118	755	Receptor kinase-like Gene Family	AT5G56890	53.765	0.0	636

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Prci643g0001		PK_Tyr_Ser-Thr	2.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci643g0001	-		-	jre:108979587	1149.04