Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci641g0003 ATGGCTAGGAGCTGGCTTATTGATGTTGGAGGGTTTGCCAAGAAAGTGAAAAGCAGTTCTCTGCCCTCAGCTGAGCAAATCAAAGACTGTGGGGCATATCGTCAATGTCCAAATTGTCATTGGCATATTGATAATAGTGATGTTTTTCCTGATTGGCCTGGCTTTCCTGCTGGTGTAAAATTTGATCCTTCTGATATAGAACTCTTGCACCATTTAGCAGCAAAATGTGGCATTGGAAATGCAGAGCCACACATGTTTATCCATGAGTTCATTCCAACGCTGGAGGGTGCTGAGGGGATTTGCTACACTCATCCTGAGAATCTTCCAGGTGCTAAAAAGGATGGGAGTAGTGTCCATTTCTTCCATAGAACAATTAATGCCTATACTTGTGGTCAACGAAAGCGTCGAAAAATTCATCATCATCATGGTGCAACTGAGGAGCATGTGCGGTGGCACAAGACAGGTAAAACCAAATCTGTAGTGGAAGATGGCCTACACAAAGGCTTTAAAAAGATCATGGTTCTTTATGTAAGACCTGAGAAAGGTTCAAAGCCATATAAATCGAATTGGGTGATGCATCAATACCATCTGGGGACTGAAGAAGAGGAGAAGGAAGGTGAATATGTGGTCTCAAAGGTTTTTTATCAGAAGAAGCAGCTTGAGAAAAATGAGGAGAATCCATTAGTTGAAGAATCAGATAATATGGCATCACGAACAAGTCCAAGAACCCCAAATCCAAATCCCCGCAATCCACCTCGACCAGGAAATTCTGCTGACTGTGATGATAATTTTGATGAAAAAGTACTCCTGTCATTCAATAAGGATGCCGAGTCTGTCCCTGGAGAGCCAAGTGCACCGGCAATTGATGTTCAGGATGAGGATAATACGAGTGGCCCTGCATGGTTGGCTGGTGAATCACAGGCTGCTGAAAACTCTGACTTTGATGGCTTGGATGACATATTATTGTGCAAGGAGATCTTAGATTCTTCTGCTAGACTAAATGATTCTGGAATGAACTCCACCATTGTTAATGGCTTTGCCAGCAACACAAACTTGTCAGTTGGAAATGACAATGCATCCTTTGGAATCTCTGACCTGGATAACTTGGAATTGGATACTCCTCCAGATTTCCAACTTTCTAACTTGCAGTTTTGTTCTCAAGACAGTATACTTGACTGGATAGACAGACTATGA 1194 0.4246 MARSWLIDVGGFAKKVKSSSLPSAEQIKDCGAYRQCPNCHWHIDNSDVFPDWPGFPAGVKFDPSDIELLHHLAAKCGIGNAEPHMFIHEFIPTLEGAEGICYTHPENLPGAKKDGSSVHFFHRTINAYTCGQRKRRKIHHHHGATEEHVRWHKTGKTKSVVEDGLHKGFKKIMVLYVRPEKGSKPYKSNWVMHQYHLGTEEEEKEGEYVVSKVFYQKKQLEKNEENPLVEESDNMASRTSPRTPNPNPRNPPRPGNSADCDDNFDEKVLLSFNKDAESVPGEPSAPAIDVQDEDNTSGPAWLAGESQAAENSDFDGLDDILLCKEILDSSARLNDSGMNSTIVNGFASNTNLSVGNDNASFGISDLDNLELDTPPDFQLSNLQFCSQDSILDWIDRL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci641g0003 397 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Prci641g0003 397 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 310 IPR044799 GO:0003700
Prci641g0003 397 MobiDBLite consensus disorder prediction 276 301 - -
Prci641g0003 397 Gene3D NAC domain 65 221 IPR036093 GO:0003677|GO:0006355
Prci641g0003 397 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Prci641g0003 397 MobiDBLite consensus disorder prediction 224 262 - -
Prci641g0003 397 FunFam NAC domain-containing protein 8 64 220 - -
Prci641g0003 397 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci641g0003 36 216 NAC Transcription Factor Family AT1G28470 55.914 2.41e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci641g0003 NAM 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci641g0003 - - gmx:100780442 582.793