Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci635g0002 ATGGTGCCAGAGAACATGAAGAAGAAACAACTTGCTTTGGCTGTGAGGAGCATCCAGTGGAGCTATGCAATATTCTGGTCTGCTTCTAGTTGCCAACCCGGGGTTTTGGAATGGGGTGAGGGATATTACAATGGCGACATAAAGACTCGGAAAACAAGTCAGGCAGTACAACTTAGGTCTGATCAAATAGGTTTGCAGAGGAGTGAACAGTTGAGAGAGCTATTTGAGTCCCTCGCAACTGCAGAATCCACACAACAAACAAAAGGGCCTTCAACTGCGCTAAGCCCTGAAGATCTCACAGATACTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTGTTCAATATTGGCCAAGGATTACCTGGACGAACTCTGGCAAATGACCAACCTATTTGGGTTTACAATGCCCCTTTTGGTGATAGTAGAATTTTCAGTCGCTCTCTGCTTGCAAAGAGTGCATCAATTCAGACGGTGGCATGCTTCCCATTTCTGGAAGGTGTAGTTGAGCTCGGGACAAGTGATCTGATCTCAGAAGACCTCAGTCTCATTCAACGTATAAAAACTTCTTTCTTGGATGTTCTGGGTGCCAGTAAGTCTGGATCTGCATTTAAAACAAGAAATAATAAAGATATTACTTCTGCAGCATTTGGCCACAGTGCTTATTATGCCAAATTACCAGAAGTGGGATCTGCTGTAAACAATAAAACTTCTCCCAATAGTTTGAGTGCGATTGAAGCAAACCAACTGGCAGATGAGACACACGTGGTTGAAAGAATAGATGGTGGTTCTTCTTTGGTCCATAGCTGGCAAGTTAGGGATGACGAATTTTGTAACGATGCCCATAACTCCATGATTTCTAGTGACTGTAGTTCTCAAACTCTGGCTGATCCTGAAAAGATAGCCTGTTGTCCTAAGGATCAAAACCCAACTGACCATTCTGTGCTAGACCACCAGGAGTGCAATAAAACGAAAATGACCTTAAAGAATTGTCGAAATGATGGTTGGCATTATCGAAAAGTTCTCTCTGCGGTTCTAAAAGACTCAGACCAGTCTGTAATTAGAGCACATTTTCAAAGTAGTAATAAGGAATCCAGCTTTGTTAGTTACAAGAAAGGAGGGTCAATGAGTTATCAAATGTTAAAAGGAGGAACCCCACAGAAGTTGTTGAAAAAGGTATTGCTTGAAGTTCCTCGGATGCATATGGATGGGCTTCTTGAGTGTCAAGAAGAAAATGATTACAAAGAGCAAATGAGACCAGAGGTTGATGAAATTGGTATGAACCATGTATTGTCAGAAAGAAGGAGAAGGGCAAAACTAAATGAAAGGTTTCTAACACTTAGATCAATGGTTCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTGGACAAGGCAATTGAATACCTCAGAAAGCTTGAGAAGAAGATTAGAGAGTTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACCAGAGCTAAAAGAACACCTCAAGATATGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGCCAATGAATAACAAGAGAAAGGCATGTGACGTTAAAGAAACATGGCAAGAAAATGATTCAGTTGCCCTAAATGACAGCTCTACTAGTAGCGTCATTATCAATTTGAGCAACACCGAAGTTCTGATTGAAATGAAACATCCATGGAGAGAAGGAGCAGTGATGAAAATTATGGAAGCACTTAGGAATCTCCACTTGGATTTACGATCAATTCAGTCATCAGAAGTTGGTGGGATTCTTCATCTAACCATTAGATCTCAGATGAGAGGGCCAACTATTGCATCAGCGAAGAAGATAAAACAAGTGCTGCAAAAAGCGGCTTGGAACTGTTGA 1878 0.4089 MVPENMKKKQLALAVRSIQWSYAIFWSASSCQPGVLEWGEGYYNGDIKTRKTSQAVQLRSDQIGLQRSEQLRELFESLATAESTQQTKGPSTALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLANDQPIWVYNAPFGDSRIFSRSLLAKSASIQTVACFPFLEGVVELGTSDLISEDLSLIQRIKTSFLDVLGASKSGSAFKTRNNKDITSAAFGHSAYYAKLPEVGSAVNNKTSPNSLSAIEANQLADETHVVERIDGGSSLVHSWQVRDDEFCNDAHNSMISSDCSSQTLADPEKIACCPKDQNPTDHSVLDHQECNKTKMTLKNCRNDGWHYRKVLSAVLKDSDQSVIRAHFQSSNKESSFVSYKKGGSMSYQMLKGGTPQKLLKKVLLEVPRMHMDGLLECQEENDYKEQMRPEVDEIGMNHVLSERRRRAKLNERFLTLRSMVPSVSKDDKVSILDKAIEYLRKLEKKIRELEACRELIDLETRAKRTPQDMVERTSDNYFNKTDNGMKPMNNKRKACDVKETWQENDSVALNDSSTSSVIINLSNTEVLIEMKHPWREGAVMKIMEALRNLHLDLRSIQSSEVGGILHLTIRSQMRGPTIASAKKIKQVLQKAAWNC 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci635g0002 625 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Prci635g0002 625 Pfam Helix-loop-helix DNA-binding domain 427 473 IPR011598 GO:0046983
Prci635g0002 625 Coils Coil 462 489 - -
Prci635g0002 625 PANTHER TRANSCRIPTION FACTOR TT8 2 622 - -
Prci635g0002 625 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 426 488 IPR036638 GO:0046983
Prci635g0002 625 Gene3D - 422 489 IPR036638 GO:0046983
Prci635g0002 625 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 423 472 IPR011598 GO:0046983
Prci635g0002 625 SMART finulus 429 478 IPR011598 GO:0046983
Prci635g0002 625 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 190 IPR025610 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci635g0002 2 625 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 44.882 1.85e-166 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci635g0002 bHLH-MYC_N 3.1e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci635g0002 - - gmx:100808167 747.273