Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci635g0001 ATGGTGCCAGAGAACATGAAGAAGAAACAACTTGCTTTGGCTGTGAGGAGCATCCAGTGGAGCTATGCAATATTCTGGTCTGCTTCTAGTTGCCAACCCGGGGTTTTGGAATGGGGTGAGGGATATTACAATGGCGACATAAAGACTCGGAAAACAAGTCAGGCAGTACAACTTAGGTCTGATCAAATAGGTTTGCAGAGGAGTGAACAGTTGAGAGAGCTATTTGAGTCCCTCGCAACTGCAGAATCCACACAACAAACAAAAGGGCCTTCAACTGCGCTAAGCCCTGAAGATCTCACAGATACTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTGTTCAATATTGGCCAAGGATTACCTGGACGAACTCTGGCAAATGACCAACCTATTTGGGTTTACAATGCCCCTTTTGGTGATAGTAGAATTTTCAGTCGCTCTCTGCTTGCAAAGAGTGCATCAATTCAGACGGTGGCATGCTTCCCATTTCTGGAAGGTGTAGTTGAGCTCGGGACAAGTGATCTGATCTCAGAAGACCTCAGTCTCATTCAACCATTTGGCCACAGTGCTTATTATGCCAAATTACCAGAAGTGGGATCTGCTGTAAACAATAAAACTTCTCCCAATAGTTTGAGTGCGATTGAAGCAAACCAACTGGCAGATGAGACACACGTGGTTGAAAGAATAGATGGTGGTTCTTCTTTGGTCCATAGCTGGCAAGTTAGGGATGACGAATTTTGTAACGATGCCCATAACTCCATGATTTCTAGTGACTGTAGTTCTCAAACTCTGGCTGATCCTGAAAAGATAGCCTGTTGTCCTAAGGATCAAAACCCAACTGACCATTCTGTGCTAGACCACCAGGAGTGCAATAAAACGAAAATGACCTTAAAGAATTGTCGAAATGATGGTTGGCATTATCGAAAAGTTCTCTCTGCGGTTCTAAAAGACTCAGACCAGTCTGTAATTAGAGCACATTTTCAAAGTAGTAATAAGGAATCCAGCTTTGTTAGTTACAAGAAAGGAGGGTCAATGAGTTATCAAATGTTAAAAGGAGGAACCCCACAGAAGTTGTTGAAAAAGGTATTGCTTGAAGTTCCTCGGATGCATATGGATGGGCTTCTTGAGTGTCAAGAAGAAAATGATTACAAAGAGCAAATGAGACCAGAGGTTGATGAAATTGGTATGAACCATGTATTGTCAGAAAGAAGGAGAAGGGCAAAACTAAATGAAAGGTTTCTAACACTTAGATCAATGGTTCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTGGACAAGGCAATTGAATACCTCAGAAAGCTTGAGAAGAAGATTAGAGAGTTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACCAGAGCTAAAAGAACACCTCAAGATATGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGCCAATGAATAACAAGAGAAAGGCATGTGACGTTAAAGAAACATGGCAAGAAAATGATTCAGTTGCCCTAAATGACAGCTCTACTAGTAGCGTCATTATCAATTTGAGCAACACCGAAGTTCTGATTGAAATGAAACATCCATGGAGAGAAGGAGCAGTGATGAAAATTATGGAAGCACTTAGGAATCTCCACTTGGATTTACGATCAATTCAGTCATCAGAAGTTGGTGGGATTCTTCATCTAACCATTAGATCTCAGATGAGAGGGCCAACTATTGCATCAGCGAAGAAGATAAAACAAGTGCTGCAAAAAGCGGCTTGGAACTGTTGA 1788 0.4128 MVPENMKKKQLALAVRSIQWSYAIFWSASSCQPGVLEWGEGYYNGDIKTRKTSQAVQLRSDQIGLQRSEQLRELFESLATAESTQQTKGPSTALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLANDQPIWVYNAPFGDSRIFSRSLLAKSASIQTVACFPFLEGVVELGTSDLISEDLSLIQPFGHSAYYAKLPEVGSAVNNKTSPNSLSAIEANQLADETHVVERIDGGSSLVHSWQVRDDEFCNDAHNSMISSDCSSQTLADPEKIACCPKDQNPTDHSVLDHQECNKTKMTLKNCRNDGWHYRKVLSAVLKDSDQSVIRAHFQSSNKESSFVSYKKGGSMSYQMLKGGTPQKLLKKVLLEVPRMHMDGLLECQEENDYKEQMRPEVDEIGMNHVLSERRRRAKLNERFLTLRSMVPSVSKDDKVSILDKAIEYLRKLEKKIRELEACRELIDLETRAKRTPQDMVERTSDNYFNKTDNGMKPMNNKRKACDVKETWQENDSVALNDSSTSSVIINLSNTEVLIEMKHPWREGAVMKIMEALRNLHLDLRSIQSSEVGGILHLTIRSQMRGPTIASAKKIKQVLQKAAWNC 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci635g0001 595 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Prci635g0001 595 PANTHER TRANSCRIPTION FACTOR TT8 2 592 - -
Prci635g0001 595 Coils Coil 432 459 - -
Prci635g0001 595 Gene3D - 392 459 IPR036638 GO:0046983
Prci635g0001 595 SMART finulus 399 448 IPR011598 GO:0046983
Prci635g0001 595 Pfam Helix-loop-helix DNA-binding domain 397 443 IPR011598 GO:0046983
Prci635g0001 595 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 393 442 IPR011598 GO:0046983
Prci635g0001 595 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 184 IPR025610 -
Prci635g0001 595 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 396 458 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci635g0001 2 595 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 44.855 3.31e-164 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci635g0001 bHLH-MYC_N 7.6e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci635g0001 - - ahf:112732736 726.087