Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci627g0001 ATGGAGATGAAGAGATTTGAAGATGTAGAAGTTAAGGGAGGGACAAGACTCAGTTTCTTAGATCACAATCTGCTAATTGTTAAGCTTGTTGAAACAAAAAGAGATATTCCAAGTAGCATTGAAGACTTAACCATGTTGAAAGTGTTGCATCTTTCTCAAAATAATTTGGAAGGTAACCTTCCATCAGATTTTGGATGTGGCCTTCCTAATCTAGAAGAGCTATATGTATGGAGCAACAAACTTTTTGGGATAATGCCAGATACTATTTCCAATGCCTCTAAGCTGATCATTCTAGCATTGACAGAAAACAATTTCAAAGGGGTTTTACCAAGCACACTTGGGGATTTAAGATACTTGAAAAAACTTGGAATAGAGGGTAATAGTTTCACCACATCAGATGCTTCCAATTCTAAAACCAACTTGATTACCTCATTGACTAATTGTAGACATTTGGAATTTTTGTTCCTCTCAGCAAATCCATTTTTTATAAAACTTCCCAAGTCCATTGGAAACTTTTCTGATTCTCTACAGGAGTTGGACATTGTTTCTTGTGGTATCAATGGTAACATACCATCAGAAATAGGGAATCTTACTAATTTGATTAAACTATCTTTGGATGAAAATGTTTTGAATGGGCCAATCCCAATAACAATTAGCAACTTACAAGCTCTGCAGTATTTGAGTCTCGAAGGCAATGACTTGCATGGCTTAATTGTTCATGACCTTTGTGAAATCAAACCACTTGGTTATTTACATCTAAGCCAAAACAAGTTTTCTGGAGCAATGACACCTTGTTTAGGAAATCTTTCTTCTTTAAGAGAACTTCACTTGGGCTCAAATAAGCTGGCTTTAGAGATACCATCTTCCTTTTGGAATTTGAAAGACATACTGGAAGTAAACTTGTCTTCCAACCATTTTGTTGGGAATCTTTCATCAAGGGTTGAGAACTTAAAAGCTCTTTCTTTATTAGATTTATCTCAAAATCATATTTCAAGCAACATTCCAACAACTATGGGTAGTTTGCAAAATCTACAAATTCTCTCTCTTGCACATAACAAATTGGAAGGATCTATTCCTAGATCACTTGGGAATTTGCTAAATTTACAAAATTTAGACCTTTCCCAAAATAATTTGTCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTGATCTTAAGTATGTCAATCTCTCTTTTAACAAACTCCAAGGAGAGATTCCAGATGGAGGTGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCTAGCTCTCTGTGGCATTATCCTTTTAAGGCTTAAACGACAAAATTCAAGGTGTCTAGCTGAAAGGGATTTATCAACTTTAGGAATGCCAAGAAGGATTTCTTATTTTGAAATCCTAGAAGCAACCAATGGATTTGATGAGAGCAACATACTTGGAAGAGGTAGTTATGGTATTGTTTTCAAAGGAAAGCTTTCTAGTGGAATGGTTGTTGCAGTTAAGATATTCAATTTTGATTCGCAAGTAATGGTAGCAAGCTTTGAAAAAGAATGTGACATACTGCGTAATGTGCGCCATCGCAATCTAGTGAAGCATTTGCTTTGGAGTATCTCCATTCTTGAATTGGATGATGAAATGATTGCTCATGTGAGCGACTTTGGAATTTCCAAACTTTTAAATGAAGGGGAATCTAAAACATACACAGAGACTATACCTACAATTGGCTATATGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATTATGCTATTGGAGGTGTTTACAAGAAAAAGGCCCACAGAAGATATATTTGTCTCTGCATTGAGCTTGAAGAGCTGGGTAAGTGAGTCAATGCCACATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGTTCATGAACATCATAAAAACAATATATTGACATCTACATTCTCCATTCTTGAATTGGCCTTAAATTGTTGCACCGATCTTCCAGAAGCACGTGGCAATATGATTGATGTTGCAGCATCATTGAACAAGATCAAGGCCATGTTTTTGCATAAGCGCCATGTTTAA 2079 0.3555 MEMKRFEDVEVKGGTRLSFLDHNLLIVKLVETKRDIPSSIEDLTMLKVLHLSQNNLEGNLPSDFGCGLPNLEELYVWSNKLFGIMPDTISNASKLIILALTENNFKGVLPSTLGDLRYLKKLGIEGNSFTTSDASNSKTNLITSLTNCRHLEFLFLSANPFFIKLPKSIGNFSDSLQELDIVSCGINGNIPSEIGNLTNLIKLSLDENVLNGPIPITISNLQALQYLSLEGNDLHGLIVHDLCEIKPLGYLHLSQNKFSGAMTPCLGNLSSLRELHLGSNKLALEIPSSFWNLKDILEVNLSSNHFVGNLSSRVENLKALSLLDLSQNHISSNIPTTMGSLQNLQILSLAHNKLEGSIPRSLGNLLNLQNLDLSQNNLSGKIPKSLELLIDLKYVNLSFNKLQGEIPDGGVFKNLTPESFMMNLALCGIILLRLKRQNSRCLAERDLSTLGMPRRISYFEILEATNGFDESNILGRGSYGIVFKGKLSSGMVVAVKIFNFDSQVMVASFEKECDILRNVRHRNLVKHLLWSISILELDDEMIAHVSDFGISKLLNEGESKTYTETIPTIGYMAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDIFVSALSLKSWVSESMPHAIIQVMDSNLLQGVHEHHKNNILTSTFSILELALNCCTDLPEARGNMIDVAASLNKIKAMFLHKRHV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci627g0001 692 ProSitePatterns Protein kinases ATP-binding region signature. 474 496 IPR017441 GO:0005524
Prci627g0001 692 SUPERFAMILY L domain-like 35 172 - -
Prci627g0001 692 Pfam Leucine rich repeat 69 128 IPR001611 GO:0005515
Prci627g0001 692 Pfam Leucine rich repeat 175 234 IPR001611 GO:0005515
Prci627g0001 692 Gene3D Transferase(Phosphotransferase) domain 1 536 691 - -
Prci627g0001 692 Gene3D Ribonuclease Inhibitor 137 438 IPR032675 -
Prci627g0001 692 SMART serkin_6 468 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci627g0001 692 Pfam Leucine Rich Repeat 343 365 IPR001611 GO:0005515
Prci627g0001 692 Pfam Leucine Rich Repeat 367 387 IPR001611 GO:0005515
Prci627g0001 692 Pfam Protein kinase domain 543 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci627g0001 692 Gene3D Phosphorylase Kinase; domain 1 440 535 - -
Prci627g0001 692 PANTHER OS04G0122200 PROTEIN 537 687 - -
Prci627g0001 692 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 144 440 - -
Prci627g0001 692 ProSiteProfiles Protein kinase domain profile. 397 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci627g0001 692 SMART LRR_typ_2 68 91 IPR003591 -
Prci627g0001 692 SMART LRR_typ_2 341 365 IPR003591 -
Prci627g0001 692 SMART LRR_typ_2 389 414 IPR003591 -
Prci627g0001 692 SMART LRR_typ_2 269 292 IPR003591 -
Prci627g0001 692 SMART LRR_typ_2 317 340 IPR003591 -
Prci627g0001 692 SMART LRR_typ_2 43 66 IPR003591 -
Prci627g0001 692 Pfam Protein tyrosine and serine/threonine kinase 472 528 IPR001245 GO:0004672|GO:0006468
Prci627g0001 692 SUPERFAMILY L domain-like 141 429 - -
Prci627g0001 692 SUPERFAMILY Protein kinase-like (PK-like) 449 684 IPR011009 -
Prci627g0001 692 Gene3D Ribonuclease Inhibitor 19 136 IPR032675 -
Prci627g0001 692 ProSiteProfiles Leucine-rich repeat profile. 367 389 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci627g0001 537 687 Receptor kinase-like Gene Family AT3G47570 35.032 6.42e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci627g0001 Pkinase 9.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci627g0001 - K13420 pcin:129297856 1343.18