LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci623g0001	ATGCTATTTTTACCAAGTCAACCTAAAAAGCCCATCGTCATTATATTGAACACGGCTTTCCTCTCAGTTCTTACACCAAAAGAAAAAAAGAGTTCTTCCAGTTTCGGAAGACCAAGGGAATTTGATCTGAAGACTGAAGCTGCTAAACCTCCTCTTCTTCTCCATTTTGACTCTAATGAATTCTTTGTCTTCTACCCTGTCCTTGAGTTTTTTTTTTTTTTTTTAGAGGGACCAACAGATGAAGCTCTAAAGAAAAAAATAGATGCCCAGAATTGTCAGAGGTTTTCCTATAAAACCTTATGTCAAGCTACCAATAGATTTGCCTCTCGAAATAAGCTCGGTCAAGGAGGCTATGGACTTGTGTACAAGGGGGAGTTGGATGATGGGAAAGAGATTGCAGTGAAGATGCCATTAAATGTGTCAACACAGCATGAGGAACAATTGATAAAGGAGATAGAGTTGCTGAGTAGCGTGAAACACCCTAATGTGGTGAAATTGTTTGGTTATTGCACTAATAAGAAAAAAATCTTACTTGTTTACGAGTACATTCCCAACAAGAGTCTCAACGTGCTTTTATTTGGTCCCAATAGGAGAGACCAGGAGCTTGATTGGAGTCGGACCTACAACATAATCGTAGGCATCGCAAGGGGTTTGAGCTATCTTCACATTAACCCCCAAAATTGCATCATCCATCGTGACATAAAGCCTGAAAATATCTTGCTTGATCATAAATGGGTGCCCAAGATTTCTGACTTTGGCCTTAGCCGCCTATTTGAGGAAGACCAAACCTTTGTCTATACTAATACAATAGCTGGCACTTTGGGATATGTGGCTCCAGAACATCTGATATCAGTAAAAACAGATGTTTATAGTTTTGGAGTTCTGGTGCTGGAACTGATAAGTGGGAAAAGATCATCATCATTTATGCCACCAGAGGGCAGTGCTATTTGTTTGCTTGATTGGGCATACAAGCTTTATGAGGAAAATAGGATCTTAGAAATTATGGACCCTGCTTTAGCAAATTCCGCAGTGACGGAGCAAGTGATAAAGTGCATTAAAATGGGTTTACGATGCGTTCAAGGTGACCCAGATTTACGTCCAGATATGGAGCGTTGTGTGTCCAAGTTAACATGTTGTGATCAAGACCACAATGAAGCCTCAATTTGCAAACCAGGAACACTTGGTTATGGACGCCATCAATCAGTCTCCCTCTCTACATTTGGAGGAGCACAACATGAGGCGAGTTATCTTGAGGATATTTCTGAGGATGAGTATGAAGGTGAGGATAGTTGA	1293	0.406	MLFLPSQPKKPIVIILNTAFLSVLTPKEKKSSSSFGRPREFDLKTEAAKPPLLLHFDSNEFFVFYPVLEFFFFFLEGPTDEALKKKIDAQNCQRFSYKTLCQATNRFASRNKLGQGGYGLVYKGELDDGKEIAVKMPLNVSTQHEEQLIKEIELLSSVKHPNVVKLFGYCTNKKKILLVYEYIPNKSLNVLLFGPNRRDQELDWSRTYNIIVGIARGLSYLHINPQNCIIHRDIKPENILLDHKWVPKISDFGLSRLFEEDQTFVYTNTIAGTLGYVAPEHLISVKTDVYSFGVLVLELISGKRSSSFMPPEGSAICLLDWAYKLYEENRILEIMDPALANSAVTEQVIKCIKMGLRCVQGDPDLRPDMERCVSKLTCCDQDHNEASICKPGTLGYGRHQSVSLSTFGGAQHEASYLEDISEDEYEGEDS	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci623g0001	430	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	229	241	IPR008271	GO:0004672\|GO:0006468
	Prci623g0001	430	Gene3D	Transferase(Phosphotransferase) domain 1	183	391	-	-
	Prci623g0001	430	Pfam	Protein kinase domain	109	373	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci623g0001	430	ProSiteProfiles	Protein kinase domain profile.	107	386	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci623g0001	430	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	81	182	-	-
	Prci623g0001	430	Gene3D	Phosphorylase Kinase; domain 1	78	182	-	-
	Prci623g0001	430	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	183	385	-	-
	Prci623g0001	430	ProSitePatterns	Protein kinases ATP-binding region signature.	113	135	IPR017441	GO:0005524
	Prci623g0001	430	SUPERFAMILY	Protein kinase-like (PK-like)	89	377	IPR011009	-
	Prci623g0001	430	SMART	serkin_6	107	377	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci623g0001	430	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	80	405	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci623g0001	79	377	Receptor kinase-like Gene Family	AT4G11530	44.554	1.54e-82	265

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci623g0001		Pkinase	3.4e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci623g0001	-		-	pcin:129297851	847.04