Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci613g0001 ATGTTTCCAGAAGAGCAAGATGATGATGGAGAGAGAGAGTTCGGTGGAGGAACATACATAAAGAAAGGACCATGGAGTGCTGAAGAAGATGAGATTCTGATGAGACATGTCAAGAAAAACGGTCCAAGAGATTGGAGCTCCATTCGGTCCAAAGGGTTGCTTCCTCGGACCGGAAAATCATGCCGGCTTCGATGGGTTAACAAGCTTAGGCCAAACTTGAAGACAGGGTGCAAGTTCTCAGCAGAGGAAGAAAGAGCGGTGATAGAATTGCAGGCACAGTTTGGAAACAAGTGGGCCAAAATAGCAACATACTTAGAAGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGTAGCAGAAGAAAGAGGTTGGAGAGAATGTTACAGAAACCATCTCCATCATCAAAGCCACTTAAGAATAACAAAGCAACAAAAAAAGCTCATATTCATCATCATAATCTACCACAATTTGAAGAGGTTCCTTCATGCAGTTCAAATCATCTGGAGGAAAACCCATCGGAGAAGTTTCAGAATCTGGAAGCACAGGAGGCCATTCCACTACACATGGTTCCATCATTCGAGTCTTCATTAGAGTACTACACATTTTCTCAAGTACTTCCCACTGAGTCCCACCAAGTGGACTATGGCCTCTTGCCGCCGGTCTGCCATGGCCTGGTCGATCCAGAGCCATTCGATGCTGTCTTTTTTGATGTTTTCGAACAGCACAAGGTTCCAGAATATGTGTGCAGCAGCAGCAGCAACAAAGGTGAGAGCAGATTGCCATGTCTTGCATTGGGAGGAATTGCTCAGAGTTCAACCCCAGCAAGTGGCTTCTTTGAGGACTTCCCAAGTGAGATATTTGACTATTTTGAAGACATTCCTGCTTCATTAGAGAAATGA 900 0.4444 MFPEEQDDDGEREFGGGTYIKKGPWSAEEDEILMRHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERAVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSKPLKNNKATKKAHIHHHNLPQFEEVPSCSSNHLEENPSEKFQNLEAQEAIPLHMVPSFESSLEYYTFSQVLPTESHQVDYGLLPPVCHGLVDPEPFDAVFFDVFEQHKVPEYVCSSSSNKGESRLPCLALGGIAQSSTPASGFFEDFPSEIFDYFEDIPASLEK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci613g0001 299 ProSiteProfiles Myb-like domain profile. 78 121 IPR001005 -
Prci613g0001 299 SUPERFAMILY Homeodomain-like 20 117 IPR009057 -
Prci613g0001 299 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Prci613g0001 299 MobiDBLite consensus disorder prediction 1 22 - -
Prci613g0001 299 CDD SANT 78 117 IPR001005 -
Prci613g0001 299 CDD SANT 24 69 IPR001005 -
Prci613g0001 299 Gene3D - 21 74 - -
Prci613g0001 299 Gene3D - 77 153 - -
Prci613g0001 299 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Prci613g0001 299 Pfam Myb-like DNA-binding domain 78 118 IPR001005 -
Prci613g0001 299 SMART sant 75 123 IPR001005 -
Prci613g0001 299 SMART sant 21 71 IPR001005 -
Prci613g0001 299 PANTHER TRANSCRIPTION FACTOR DUO1 16 296 - -
Prci613g0001 299 FunFam Transcription factor GAMYB 77 149 - -
Prci613g0001 299 FunFam MYB transcription factor 22 74 - -
Prci613g0001 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 73 IPR017930 -
Prci613g0001 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 125 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci613g0001 20 128 MYB Transcription Factor Family AT3G60460 84.404 8.90e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci613g0001 Myb_DNA-binding 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci613g0001 K09422 - pcin:129316628 606.29