Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci605g0001 ATGAGAAAAACCTACTTCGAAAAAAACTTAAGAGATGTTGGAATCAGAACTTTGATTGATGATCAGAGGGAGGAGTTTTCCATGCATGAGATAGTAAAGTGCAGAATGGTTGTGGTTGTTTTCACACCAGACTTCGTTGAATCCGACGTATTTCTGGCGAGACTGATGAATATAAGGCGGTGCCAAAAACTGACGAACAAAGAAGTGTTGCCTCTGTTCTGTGGAGTGAGTGAGGAGCAAGTACGTGAGCAGTTTGAGGATATGGATCAGAGAAGATTAGATGCTTGGGATTTGGATTTCGATTTGGATTTTGGAGGATTTCCAGCTGAAGCTGCTTCGCTTTTGGATTCAGGAAGAGCCACCGCTGAAGCTGCTTCGTTATCTGGCTTTACTCTGTTGTCTGATTTGGGGAATAAAATCAGCAACATTATTGCGAATTTATACAAATACTTGTTTCATGAAGACTTGTTTCACGATCTTCAATACCATCAAGCAGGGTTACGACTTCGTTTAAGAGAATTGCTTGATATTTTGCGACAAAAATATATTGCTTCAGGAGATACGATCATAGTTGGAATCTGGGGTGTTGGAGGTATTGGTAAAACTACGATTGCGAAAGCTTTTTATGATAAAATTGGTGGTGATTTTGACGGTAAAAGTTTCCTTACAAATATCAAGGATGTATGGGATAAGCGTAATGGTAGAGTTCTTAAAAAGCAGCTTATTTCAGATATTTCTGAAGTTGAACTCGATGAGAAAAGTGATGTCCTAGTGATACATGAACAAATGAAGCAAATACTCCATGGAAAAAGAGTCCTAGTAGTACTTGATAACGTCGATAGTGGATTCCAGCTCATGGAACTGTGTGGGAATATCAAGTGGTTTGGTAGAGGGAGTTTGATATTCATTACAGCAAGAAATGAGGATATCTTTAAAAACTTTGTTGATGTATCATATGAAATGAAAAGGTTAGATAGTGATGAGTCTATTAAGCTTTTCAACTGGCATGCATTTAAGAAATCTACTCCAACAAATGATTTTGAGTATCTTTCATCCACAATCATTACTTTTTGTGAAGGACTACCATTGCTTCATGAAGTTATTGGCTCTCTTTTACATAATAGGACATTACAAGAGTGGCAAGGTGTATTGAATGAATTGGGTAGGACTTCTTATGGTCAAATAAAAACAAAGCTCTACATTAGCATTGATTTTTTAACTGATTCAGAGAAAGATTTGTTCTTTAATATAGCTTGTTTTTATGTGGGTCAGAGCAAAAACTATGTTATACAGTTGTTAAAAGGATCAAGATTTCCTGTGAAAATGGGAATGCCCGTAATCATTGAGCGTAACCTTGTAAAGGTCATGAATGACAAGCTTTATGTTCATGATTTGCTGCAAGAGATAGTAAGAAGCCATCGTGACAAGCCACTGTTCAAATATAGTTATGATGTATTCTTAAGTTTTAGAGGTGATGATACACGAAAATCCTTTGCTACTCATCTTTGCTCTGCTATAAAGCAAGCAGGTATTGACATCTACATGGATGAAGAACGAATTGAAAGAGGAAAAAACATTTCATCTTCACTACTGCAAGCAATTGAAAGTTCCAAAATTTCAATAATTATACTATCAAAGAATTATGCTGGCTCTAGTTGGTGTTTGCAAGAATTAGAGAAAATCATGGAATGTTACCGAACAACTTATCAAGAGGTTTTACCTATATTTTTTGATGTGCGACCATCTGAAGTTCGAAAACAAACAAATTCTTTTGGAAGAGCATGGGATAGACTTATCAAGAGAAATTCAAGCAATGAAGTGGAGACATGGACAATTAATTCACGGAGAGCCCTCATAGAAGTTGCCAACTTATCCGGATGGGACATGCAGAACTACAGAACTGAAACTGAGCTGATTGATGAAGTCATTGAAACTATTACAAAGAAGTTGGGTGACAACAAATGCCTATTTGTAGCTCATCATCCAGTGGGATTGAAGTCTCGTATGCAAGATATCCTCCAATTGCTAAGAAGTAAATCAAAAGATGTTATCATTGCAGGGATTTGGGGGATGGGGGGGATTGGTAAGACAACGATTGCTAAAGCTATCTACAATCAAGTTGGTCAAAGTTTTGAAGGGAAGTGTTTCCTTGCAAATGTTAGGGAAGTATGGAAGCAACATAATGGCCAAGTTTATTTGCAAGAACAACTTCTTTCAGACATTCTAAAAGCAAGAAGGTGGGCTTTACCAAATGTAGAAATGGGGAAAACCCTACTGGAGGAAATGCTTTGTAAGAAAAGAGTACTTGTTGTACTTGATGATGTGAACAATGAAGACCAACTTAAAGCATTATGTGGAAGTCGAGAATGGTTTGGCCAAGGTAGTAGAGTAATCATTACAACTAGAGATCAACGTTTGCTTAAGATCCTTAGAGTATTTCATGTCTACAACATGAAAGAGTTGGATGATAATGAATCTCTTGAACTTTTCAGTTGGCATGCATTTAAGCAAGCGATCCCTGAACAAGAAGACTTCATTGAACTTTCAAGGAGGGTAGTTTCTTATTCTGGAGGTTTGCCACTAGCTCTTGAAATTCTTGGCTCCTACCTGTTTGATAGAGAGATACTTATTTGGAAAATAGTTTTGGAAAAATTACAACGAATTCCAAATGATCAAATACAAGAAAAACTGAAAATAAGTTATGATGGTTTGAGTGACCATATAGAGAAGGATGTGTTCCTTGATATATGTTGTTTTTTGGTTGGCAAGGACAAAAGTTATGCTACACAAATATTAAATGGTTGTGGATTTCATGCGGAAATTGGAATTAATCGTTTGATAGAGTTGAGTCTTGTAAAGGTTGGCAACAAAAACAAACTTGATATGCATGACTTACTACGTGACATGGGAAGGGAAATAATTCGTGAGCAATCACCAGAGGAGCCTGAGAACCGTACGAGATTATGGTTTTATGATGATGTAATGGATGTGTTGACAAATACCACTGGAACGATGGCTATCAAGGGACTAGCTTTGAATATGTCAAATAATAATTCAGTTTCTTTGAGTGCAAAAGCATTTAAGGGGATGAAGAGGCTTCGTTTGCTACAACTTAATCATGCACAACTTACTGGAGACTATAATTATCTATCAACAAAATTGAGATGGCTTTGTTGGCATGGATTTCCCTTAGAGAACATGCCAATCAACTTATGTCTAAAAGAAATAGTTGCCATTGACTTAAAGAGGAGCAGTCTAAAAAAAGTATGGGAGAAATACCAGTTGTTGGAGAGGTTGAAAATTCTCATTCTGAGTCATTCTCATTACTTGACGGCGACACCAAAATTTACAAAGTTACCATACCTTGAAAAGTTAATACTCAAAGATTGTCCACGTTTGTCTATAATTCATCCTTCAATTGGTGATCTTAAATATATTATTCTGTTAAATCTGAAGGATTGCAAAAGCCAAAACCTCCCAAGAAGTGTATATAAGTTGAAATCCTTGAAGACCCTTAATCTTTGTGGTTGCTCAAAAATTGAAAAGTTAGAAGAAGACATTGAGCAAATGGAATCTTTGTCAACTTTGGTGGCAAATCAAACTGCTATAGTACAAGTTCCATTCTCATTAGTGAGACTGAAAAGCATTAAATATGTGTCTCTATGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTCTGTCTTGGATGTCACCAACTCATCGTTCAAGGTCCTTATTCCAAACATTTCAGATTTTACCATCTCTAATTAGGAGCATGTCACATCCTTTATTTGTTAAAAGCAATGAAAGTGTGGAACCAAGGCCAAGCACAGATGAAGCTTCATGTCGAAAATCTCCAACATTAATTGAATTTCATGAACAAGTTCCCATTAAAAGATTAGAAACATTTACGAGTACTCTGACAATTCTTGTTGGCAGTTTCAACAAAGTTGCTGATACACTTTTAAAGAGTATTTCACAGGGATGGCATGATGGTGGGCTTGATTTTTCTATTCCAACAGACAATTATCCAGATTGGCTAGTTTTTGATGCTGGAACAACTTATGTGGATAAAGAATGGCAGAACATAGCATCTAATTTGGAGCCTGGAGATGAGATGAAAGTTAAAGTTGAATTTGCACATAGGTATAATGTGAAGAAGACTTCAATCTATCTTATATATGCTGAAGAAACTAATGAGCTAAGCATCACCGAGTAA 4230 0.3641 MRKTYFEKNLRDVGIRTLIDDQREEFSMHEIVKCRMVVVVFTPDFVESDVFLARLMNIRRCQKLTNKEVLPLFCGVSEEQVREQFEDMDQRRLDAWDLDFDLDFGGFPAEAASLLDSGRATAEAASLSGFTLLSDLGNKISNIIANLYKYLFHEDLFHDLQYHQAGLRLRLRELLDILRQKYIASGDTIIVGIWGVGGIGKTTIAKAFYDKIGGDFDGKSFLTNIKDVWDKRNGRVLKKQLISDISEVELDEKSDVLVIHEQMKQILHGKRVLVVLDNVDSGFQLMELCGNIKWFGRGSLIFITARNEDIFKNFVDVSYEMKRLDSDESIKLFNWHAFKKSTPTNDFEYLSSTIITFCEGLPLLHEVIGSLLHNRTLQEWQGVLNELGRTSYGQIKTKLYISIDFLTDSEKDLFFNIACFYVGQSKNYVIQLLKGSRFPVKMGMPVIIERNLVKVMNDKLYVHDLLQEIVRSHRDKPLFKYSYDVFLSFRGDDTRKSFATHLCSAIKQAGIDIYMDEERIERGKNISSSLLQAIESSKISIIILSKNYAGSSWCLQELEKIMECYRTTYQEVLPIFFDVRPSEVRKQTNSFGRAWDRLIKRNSSNEVETWTINSRRALIEVANLSGWDMQNYRTETELIDEVIETITKKLGDNKCLFVAHHPVGLKSRMQDILQLLRSKSKDVIIAGIWGMGGIGKTTIAKAIYNQVGQSFEGKCFLANVREVWKQHNGQVYLQEQLLSDILKARRWALPNVEMGKTLLEEMLCKKRVLVVLDDVNNEDQLKALCGSREWFGQGSRVIITTRDQRLLKILRVFHVYNMKELDDNESLELFSWHAFKQAIPEQEDFIELSRRVVSYSGGLPLALEILGSYLFDREILIWKIVLEKLQRIPNDQIQEKLKISYDGLSDHIEKDVFLDICCFLVGKDKSYATQILNGCGFHAEIGINRLIELSLVKVGNKNKLDMHDLLRDMGREIIREQSPEEPENRTRLWFYDDVMDVLTNTTGTMAIKGLALNMSNNNSVSLSAKAFKGMKRLRLLQLNHAQLTGDYNYLSTKLRWLCWHGFPLENMPINLCLKEIVAIDLKRSSLKKVWEKYQLLERLKILILSHSHYLTATPKFTKLPYLEKLILKDCPRLSIIHPSIGDLKYIILLNLKDCKSLXNLPRSVYKLKSLKTLNLCGCSKIEKLEEDIEQMESLSTLVANQTAIVQVPFSLVRLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTHRSRSLFQTFQILPSLIRSMSHPLFVKSNESVEPRPSTDEASCRKSPTLIEFHEQVPIKRLETFTSTLTILVGSFNKVADTLLKSISQGWHDGGLDFSIPTDNYPDWLVFDAGTTYVDKEWQNIASNLEPGDEMKVKVEFAHRYNVKKTSIYLIYAEETNELSITE 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci605g0001 1410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 415 IPR027417 -
Prci605g0001 1410 SMART till_3 482 624 IPR000157 GO:0007165
Prci605g0001 1410 FunFam Disease resistance protein (TIR-NBS-LRR class) 480 652 - -
Prci605g0001 1410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 916 IPR027417 -
Prci605g0001 1410 ProSiteProfiles TIR domain profile. 481 650 IPR000157 GO:0007165
Prci605g0001 1410 Gene3D Ribonuclease Inhibitor 1005 1240 IPR032675 -
Prci605g0001 1410 Gene3D - 820 905 IPR042197 -
Prci605g0001 1410 Gene3D - 323 406 IPR042197 -
Prci605g0001 1410 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 91 IPR035897 -
Prci605g0001 1410 Coils Coil 1181 1201 - -
Prci605g0001 1410 SUPERFAMILY Toll/Interleukin receptor TIR domain 479 627 IPR035897 -
Prci605g0001 1410 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 483 1228 IPR044974 GO:0006952
Prci605g0001 1410 SMART AAA_5 682 822 IPR003593 GO:0016887
Prci605g0001 1410 SMART AAA_5 187 325 IPR003593 GO:0016887
Prci605g0001 1410 Gene3D - 651 813 IPR027417 -
Prci605g0001 1410 PRINTS Disease resistance protein signature 762 776 - -
Prci605g0001 1410 PRINTS Disease resistance protein signature 856 870 - -
Prci605g0001 1410 PRINTS Disease resistance protein signature 685 700 - -
Prci605g0001 1410 PRINTS Disease resistance protein signature 1165 1181 - -
Prci605g0001 1410 Gene3D - 479 650 IPR035897 -
Prci605g0001 1410 Gene3D - 3 156 IPR035897 -
Prci605g0001 1410 Gene3D - 161 317 IPR027417 -
Prci605g0001 1410 Pfam NB-ARC domain 671 897 IPR002182 GO:0043531
Prci605g0001 1410 Pfam NB-ARC domain 187 397 IPR002182 GO:0043531
Prci605g0001 1410 SUPERFAMILY L domain-like 975 1241 - -
Prci605g0001 1410 Pfam TIR domain 30 88 IPR000157 GO:0007165
Prci605g0001 1410 Pfam TIR domain 483 651 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci605g0001 31 477 WRKY Transcription Factor Family AT4G12020 25.926 5.61e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci605g0001 - - pcin:129288830 1724.52