Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2504 ATGGAATTTGTGGTGAACAGGTCTCGTGTTTTGTTTGTAGTTGTTATCTCTGTACTCTCTCTCCAACCTGTTAGATCAAGAGATAACGATGCCCAAGCACTTTTAGCGCTCAAATCCTCTATTGATGTTCACAATACACTTCCATGGCCACCAGGAGGCAAAAATCTCTGCGACTGGGAAGGAGTCAGAGATTGCTTCAAGGGAAGAGTCCGAAAGCTAGTGCTGGAGAACTTGAACTTAACAGGCGATTTGGACCCAAAGATCTTGAACCGATTGGATCAAATTCGAGTACTCAGTTTCAAGAGCAACTCACTGTCTGGTCCAATCCCGGACCTCTCTGCCCTGGTCAATCTCAAATCCATATTTCTCAACGATAACAACTTCTCCGGCGACTTCCCAGCCTCCATCTCCGGTCTCCACCGTATCAAAGTCATAGTTCTGTCTGGCAACCGACTCTCCGGCAATATCCCGTCGTCGCTGCTCAAGCTCCGGCGTCTCTACATGCTTTACTTGCAAGATAACTCGTTCACAGGACCCATCCCGGGCCTCAACCAAAGCAGTCTCCGATACCTGAACGTCTCCAACAACCAACTTACCGGCCAGATCCCGGCGAGCCCAGCATTGATCCGTTTTAATGAGTCGTCGTTTTTGGGGAACCCGGGCATGTGTGGGGAACAAATCCACAAGGCATGCGAAATGCCTCCGTCGGTAAGCCCGAGTTACCCGTTGGTGCCAGGGAGAAGGGAGCCAAGGTCGTCGTCGTTGTCTAACCGGAAGAAAGTGATAAAGATAGTAGGAGGGACCATCGGAGGATTTGCGGTGCTTGTGATATGCTTGGTTGTAATATGTATGATGTGTAGGAATCGCAAAGAAGAGAAGGGTTCAAGACGCAGGAAGAAAGGAGGAGGAGGGGAGGGGGGAGGAACAGAGACAGGAACAGGAACGGGTGGTGAAAGTGGCAGGGGAGGTAATAATGGGGGTAAAGAAGGGGGTTTTTCATGGGAAGATGAGGGACTGGGGAAGTTGGTGTTCTGCGGGGCGGGGGATAGTTATAGGTTGGAGGATTTACTGAAGGCGTCGGCGGAGACGCTGGGGAGGGGTAGTGTGGGAAGTACATACAAGGCAGTGATGGAGTCAGGGTTTATAGTGACGGTGAAGAGGCTGAAGGATGCGAGGTATCCTGGCTTGCAGGATTTCACCGCACACATGGAGCTGCTAGGCAGGCTTAGGCACCCTAATCTGGTCCCGCTTCGGGCTTATTTTCAGGCTAAGGAGGAACGCCTTCTTGTTTATGATTACTTTCCCAACGGCAGCCTCTTCTCTCTTGTCCATGGATCAAAAACTTGTGGTGGGGGAAAGCCTCTTCACTGGACATCAAGCCTCAAAATTGCCGAAGACCTAGCAACTGGACTCGTGTATATCCACCAGAACCCTGGCTTAACCCATGGGAACCTGAAATCTTCTAATGTGTTGCTGGGTTCGGACTTCGAGTCATGTCTTACAGATTATGGCCTCCAAGTGTTGCTGAATCCAGATTCACTGGAAGAACCCAGCGCCACCACTTTATTTTACAGAGCACCGGAGTGCCGGAGCATCCGAAGGGCTCCCACTCAGCAAGCTGATGTATACAGCTTTGGGGTACTTCTCCTGGAGCTTTTAACCGGGAAAACACCCTTCCAAGACCTTGTTCTGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCCGTGCGGGAAGAAGAGACGGAGTCCGGGTCCGGGGATGACCCTGCCTCGGGGAATGACGCCTCAGAAGAAAAGCTTCAGGCGCTTTTGAACATTGCAATGGCGTGTGTTTCACTGGTACCAGAAAACAGACCAACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGCGGAGGCTCAAGTGTCCTCAAACAGTAGTGATCATTCTCCGGGCAGATGGTCAGATACTGTGCAAAGCTTACCTCGGGAAGAGCATTTGAGCATATGA 1998 0.506 MEFVVNRSRVLFVVVISVLSLQPVRSRDNDAQALLALKSSIDVHNTLPWPPGGKNLCDWEGVRDCFKGRVRKLVLENLNLTGDLDPKILNRLDQIRVLSFKSNSLSGPIPDLSALVNLKSIFLNDNNFSGDFPASISGLHRIKVIVLSGNRLSGNIPSSLLKLRRLYMLYLQDNSFTGPIPGLNQSSLRYLNVSNNQLTGQIPASPALIRFNESSFLGNPGMCGEQIHKACEMPPSVSPSYPLVPGRREPRSSSLSNRKKVIKIVGGTIGGFAVLVICLVVICMMCRNRKEEKGSRRRKKGGGGEGGGTETGTGTGGESGRGGNNGGKEGGFSWEDEGLGKLVFCGAGDSYRLEDLLKASAETLGRGSVGSTYKAVMESGFIVTVKRLKDARYPGLQDFTAHMELLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTCGGGKPLHWTSSLKIAEDLATGLVYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRSIRRAPTQQADVYSFGVLLLELLTGKTPFQDLVLEHGSDIPRWVRSVREEETESGSGDDPASGNDASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARAEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2504 665 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2504 665 Gene3D Phosphorylase Kinase; domain 1 350 433 - -
Prci5g2504 665 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Prci5g2504 665 Gene3D Transferase(Phosphotransferase) domain 1 434 653 - -
Prci5g2504 665 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Prci5g2504 665 MobiDBLite consensus disorder prediction 293 332 - -
Prci5g2504 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 636 IPR046959 -
Prci5g2504 665 Pfam Protein kinase domain 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2504 665 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Prci5g2504 665 SUPERFAMILY Protein kinase-like (PK-like) 362 629 IPR011009 -
Prci5g2504 665 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Prci5g2504 665 MobiDBLite consensus disorder prediction 636 665 - -
Prci5g2504 665 FunFam Nuclear pore complex protein NUP107 27 182 - -
Prci5g2504 665 Gene3D Ribonuclease Inhibitor 185 234 IPR032675 -
Prci5g2504 665 SUPERFAMILY L domain-like 29 224 - -
Prci5g2504 665 MobiDBLite consensus disorder prediction 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2504 Prci-Chr5 41451209 41455426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2504 4 665 Receptor kinase-like Gene Family AT1G60630 60.735 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci5g2504 Pkinase 7.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2504 - - gmx:100820186 926.776