Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2489 ATGGTTGTGATCATGCAGCAGCAGCAGAATCCCTCTGCACTGGTGCCACAGCTCAACAACAATCCTCAGTCCTCGTCTGCCACTGCCACGTCCTCCTCCTCCCTTAGGTCACCGACTTCTGCAGCACCTCCACCCCTGTCCCAGTTATCTTCCCCACTCCCTCTTGTTGCTTCTCCCTCCGCCCCCCTCCGCCAGACTCATCTGCCATCACTGCCACCCGATCATGTAATTGGACCAGTGGTGCCCATAGCTGCCACCCACCCTTCTGGTGAGCCCGCTTTGACAGCGCCACCCGCCTGCCCGTTGCCTAAAGTCCGGCTCTCGGATATTGCCCAATATGACGGAGCTCCATCTGGGTCCTATGTCAGAGCAGTAGAAGCACTGTCTGGGTCTTTGATGAGGCATAATGCAGTCTTGATCGAATTGGGCAGCGAGGATGCTGCTCTGATGAGGTGCGGGTTGGAAGGTTCGAGATTGTTCTTTCGGAGCAGGGCTCATCTGGCTGGTGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTCGGATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACTTTGTGTGCCCTTGCAAGGCATCTTCATCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTCTCCTCCTCAGTTCTTGTTGCAACCTACTCACATGCTTCTTTGCCAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCGTGAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATATCCTCAGACGCTCCTGGTCTTCAGGTTTGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGATCTTTTATTGCTTACAGGCAAGGCACTTAGTCAAGCTACTGCAGGGCTTCGTCCTGCGGCATCATATAAAGCTTCTCCTGATTATTTTTTAGGTTCTAACAGTGGAGGAAGGACATCTCTTGCATTTAGACTCATGCCACAGGGCAATGCTATATTAGATTGTTCTCCCATTGCAGCAGCTGGACATATCATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAATTTATGGATGATCTTTCTGCTGAAGAAGAAGCAATAGGCAGCCGATCTTATCAGACTTATGTTGCTGGAAACAATGTAAATAAGGAACAATCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGCGCATTCCTTGAAGATGCCATGCTTATCTCATGTGGGCATTCATTTGGTGGTCTCATGCTAAGGAGAGTCATCGAAACTTCAAGATGTCCTCTCTGCAATGCAAATATTGAGGCCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCAGCCACAGCAGTCAAGCATGAGGATGATCGAAGGTTGTTTCATAATGCTGTTCTCCGAAAGCGCCGGAAAGAAATGGGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGAAAATGGAGATGTTACTGGTGATGATGGACCCCACCGAGGAGTACAGTATCCTTTTTCAGTAAATGAGAAGGTTATAATTAAGGGTAATAGGAGGACACCAGAAAAATTCGTTGGCAAAGAAGCTGTTATTACATCTCAGTGTCTGAATGGCTGGTACTTGCTTAAGATCATTGGAAGTGGGGAGAATCTGCGCTTGCAATACCGATCTCTTAGGAAGCTTTTGAACTCACCAGCGATAGAGGACCAGTCGCAGCCAATTCAAAATAGCAGCTCTTAA 1806 0.4839 MVVIMQQQQNPSALVPQLNNNPQSSSATATSSSSLRSPTSAAPPPLSQLSSPLPLVASPSAPLRQTHLPSLPPDHVIGPVVPIAATHPSGEPALTAPPACPLPKVRLSDIAQYDGAPSGSYVRAVEALSGSLMRHNAVLIELGSEDAALMRCGLEGSRLFFRSRAHLAGGKGSRGVHMYRAGRALEDSDSSPPCMADIFRCMGKAARSTLCALARHLHLRSDVFNHLLDDTPLPANEVSSSVLVATYSHASLPNGKGAIGGGKPTVNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLRPAASYKASPDYFLGSNSGGRTSLAFRLMPQGNAILDCSPIAAAGHIIPQSYVPISVSQFMDDLSAEEEAIGSRSYQTYVAGNNVNKEQSLRSVLSDPLSGAFLEDAMLISCGHSFGGLMLRRVIETSRCPLCNANIEASSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRTNRENGDVTGDDGPHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGSGENLRLQYRSLRKLLNSPAIEDQSQPIQNSSS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2489 601 Coils Coil 487 507 - -
Prci5g2489 601 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 100 598 - -
Prci5g2489 601 SUPERFAMILY RING/U-box 412 478 - -
Prci5g2489 601 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 404 477 IPR013083 -
Prci5g2489 601 MobiDBLite consensus disorder prediction 496 517 - -
Prci5g2489 601 MobiDBLite consensus disorder prediction 496 523 - -
Prci5g2489 601 MobiDBLite consensus disorder prediction 1 71 - -
Prci5g2489 601 SUPERFAMILY Clavaminate synthase-like 194 382 - -
Prci5g2489 601 MobiDBLite consensus disorder prediction 1 44 - -
Prci5g2489 601 Gene3D - 182 390 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2489 Prci-Chr5 41330488 41339744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2489 412 588 Plant U-box Gene Family AT5G05230 40.782 8.36e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2489 - - adu:107477161 892.878