Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2486 ATGAGTACTCGAGCGCTCAGGGGTGCTGCTGTCAGAAGTTACCGGCGGAGGAAGACAGCTCTGGACTTGGATCTTAACCGGGATCCACCTGTTGAAAGTCGGGAGCTGGAGGGACCTTCAGCTCAGCTGGAGCCTCAAGCTGGCCTTCAACTGCAGGTTGCACAAGCACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCTACTCCCCGGGCTTTTGCTGAGGCTAAAAACAATTCAAGGAGAAATCGCAGCAGGGCTATAGTTGATGTGGATTTAGAAGATCGGACTAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGGTTCTCCAAGCCAAACAATTATTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGTTCTATGAAAGAAAATGTTAGGAAGTCTCCTGAACCTCCGAAGGAGCCTGTTTTCAACTGCCCAATCTGTATGGGTCCTTTGGCGGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCGATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTTACCGCGAAAGAGCTCATAAGGGTTTTTCTGCCATCAACTACTTGA 633 0.4629 MSTRALRGAAVRSYRRRKTALDLDLNRDPPVESRELEGPSAQLEPQAGLQLQVAQAQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRSRAIVDVDLEDRTRVTNNNRNKRRRGSPSQTIINCDLYINLEGSSGSMKENVRKSPEPPKEPVFNCPICMGPLAEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTT 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2486 210 MobiDBLite consensus disorder prediction 21 42 - -
Prci5g2486 210 ProSitePatterns Zinc finger RING-type signature. 170 179 IPR017907 -
Prci5g2486 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 208 IPR013083 -
Prci5g2486 210 ProSiteProfiles Zinc finger RING-type profile. 155 193 IPR001841 -
Prci5g2486 210 PANTHER ELFLESS, ISOFORM B 1 209 - -
Prci5g2486 210 SMART ring_2 155 192 IPR001841 -
Prci5g2486 210 Pfam Zinc finger, C3HC4 type (RING finger) 154 192 - -
Prci5g2486 210 SUPERFAMILY RING/U-box 154 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2486 Prci-Chr5 41321038 41328364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2486 12 209 C3H Transcription Factor Family AT5G48655 52.475 1.45e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2486 K22651 - qsa:O6P43_016885 286.574