Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2482 ATGAATCTGAATCTCACACAGGCTTCCCGTCGTGGACACCTGTCTTGTTACGCGTGTAGCCGTGCAGCGGGAGTGCAGAGTCCACGACAGTCTCCTCAATCTCATTGTCTTCTTTGCTCTTCACCCTCTTCCTTGGCCTTCCTGGCTCCGAGCCCTAAACACCAAAGATCTGATTCCCCCCTATCCTCTATCTTCGTGCGCTGTCAGACTCCAGACTCGTCTCCCTGTCCTTCTGGGCACAATCTCTTCACCGTCTCACGTGGTTTGAACTTGGATAAGGAAGTCTTGTATATAATGAGTACTCGAGCGCTCAGGGGTGCTGCTGTCAGAAGTTACCGGCGGAGGAAGACAGCTCTGGACTTGGATCTTAACCGGGATCCACCTGTTGAAAGTCGGGAGCTGGAGGGACCTTCAGCTCAGCTGGAGCCTCAAGCTGGCCTTCAACTGCAGGTTGCACAAGCACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCTACTCCCCGGGCTTTTGCTGAGGCTAAAAACAATTCAAGGAGAAATCGCAGCAGGGCTATAGTTGATGTGGATTTAGAAGATCGGACTAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGGTTCTCCAAGCCAAACAATTATTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGTTCTATGAAAGAAAATGTTAGGAAGTCTCCTGAACCTCCGAAGGAGCCTGTTTTCAACTGCCCAATCTGTATGGGTCCTTTGGCGGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCGATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTTACCGCGAAAGAGCTCATAAGGGTTTTTCTGCCATCAACTACTTGA 927 0.48 MNLNLTQASRRGHLSCYACSRAAGVQSPRQSPQSHCLLCSSPSSLAFLAPSPKHQRSDSPLSSIFVRCQTPDSSPCPSGHNLFTVSRGLNLDKEVLYIMSTRALRGAAVRSYRRRKTALDLDLNRDPPVESRELEGPSAQLEPQAGLQLQVAQAQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRSRAIVDVDLEDRTRVTNNNRNKRRRGSPSQTIINCDLYINLEGSSGSMKENVRKSPEPPKEPVFNCPICMGPLAEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2482 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 306 IPR013083 -
Prci5g2482 308 Pfam Zinc finger, C3HC4 type (RING finger) 252 290 - -
Prci5g2482 308 SUPERFAMILY RING/U-box 252 297 - -
Prci5g2482 308 PANTHER ELFLESS, ISOFORM B 99 307 - -
Prci5g2482 308 SMART ring_2 253 290 IPR001841 -
Prci5g2482 308 ProSiteProfiles Zinc finger RING-type profile. 253 291 IPR001841 -
Prci5g2482 308 ProSitePatterns Zinc finger RING-type signature. 268 277 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2482 Prci-Chr5 41321038 41328520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2482 110 307 C3H Transcription Factor Family AT5G48655 52.475 4.05e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2482 K22651 - qsa:O6P43_016885 286.574